Tetraodon nigroviridis (spotted green pufferfish): GSTEN00026089G001
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Entry
GSTEN00026089G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K16499
protocadherin delta 2
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tng04515
]
GSTEN00026089G001
Cell adhesion molecules [BR:
tng04515
]
Cadherins
Protocadherins
GSTEN00026089G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-ProteinID:
CAG05910
UniProt:
Q4S0C2
LinkDB
All DBs
Position
2
AA seq
891 aa
AA seq
DB search
MSSCTKLTDEEEQGPGTVIGNIAKDAGYGTTERGKKSNFRVLENSAPHLVDVDPESGLIF
TKQRIDRETLCRRNPKCQLSMEVFANDKEICMIKIDILDINDNSPSFPSDHINIDISENA
AAGTRFPLTIAHDSDTGENGIKTYQVTRDDYNTFSLDLKVRGDGTIYPELVVQRPLDRED
ESHHTLLLTAIDGGEYPRSGSMQINVRVTDSNDNSPVFEKSSYVIEIPENSPPGKILIDL
NATDHDEGSNGQVVYSFTGYASERIQDLFSIDPNTGVVKVQGEIDFEENPIIEFDVQAKD
LGPNPIPGHCKITVKVLDKNDNSPIISFVSVRQGAISEAAPPDSVIALVRVTDKDSGRNG
QLQCRVLGNVPFRLQENNDNFYTLLTDRPLDREMKDEYNVTIVARDNGIPSLNYTKSFTV
KILDENDNAPRFTKTVYMLQVPENNIPGEYLGSIVAHDPDIGRNGTVSYSILPSHIGDVS
VYTYVSVNPTNGAIYASRSFNYEQTKSFEFKVQAKDGGAPHMESTSTVRVNILDVNDNLP
VIILPILLNDTAEIPVPRNVGIGYIVTTVKAVDHDHGESGHLTYEITEGNDEHLFEIDPV
GGEVRTAHSLWEEVAPVVELVVKTENFSSEPNYAGNRQPFVQSSTFKDAERASLRDSGHG
DSDQADSDQDTNKGSHCDTSAREALKMKATAVNAQPFEQEQDKSAHCTDECRALGHSDRC
WMPKLRVGSQADSADNRTNLFIPVGMDAMVETEIYGTISCSSRKTLSTFGKEQRDSTILV
ANVKPYLKSQHALSPPQQESPSASGSPTKSSLPLNLAKQESTGEKEGGSDISAYGPPDGQ
CSPLHTELEEPSYLTCELRPKSLSSSLIHSSVISQECGGSDFAHDPKDSAT
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgagctcctgtaccaaactcactgatgaggaggaacaaggacccggcacagttataggt
aatatagcgaaagatgccggttatgggaccacagagagagggaagaaatccaacttcaga
gtgctggagaattctgcaccacatctggtggatgttgaccctgagagtggactcatcttc
accaaacagcggattgacagggaaacgttgtgcagacgcaaccccaagtgccagctgtcc
atggaggtgtttgcaaatgacaaggagatatgcatgattaagatcgacatactggacata
aacgacaactcgcccagttttccctcagaccacattaacattgatatttcagaaaatgca
gcagctgggactcgctttcctctgactattgcccatgactctgacactggggagaacggg
ataaaaacctaccaggtcacacgagatgattacaatacgttttccctggatttaaaagtg
aggggtgatgggactatatatccagagctggtggttcagagaccgctggacagggaggac
gagagccatcacaccctgctgctcacagcaatagacggtggggagtatccaagatcgggc
tctatgcaaatcaatgtcagggtgactgattccaatgacaacagcccagtttttgagaaa
tcctcttatgtgattgaaattccagagaattcccctcctggaaaaatactgatagatctg
aacgccacagatcacgatgagggaagcaacgggcaagtggtctattccttcactggatac
gcatctgagagaatccaggatcttttctccattgaccccaatactggcgtggttaaggtc
cagggagaaattgactttgaagaaaatccgatcatagagtttgacgtgcaggccaaggat
ctcggacccaacccaatcccgggccactgtaaaattactgtcaaagtgttggacaaaaat
gacaactcgcccataataagttttgtttctgtccgacagggagccatcagtgaggcagcc
ccgcctgactctgtcatagctttggtgcgagtgactgataaagactcgggcagaaacggt
cagcttcagtgcagggtgctgggaaacgtgcccttcagactgcaggaaaataatgataat
ttttacactctgctcacagacagacccctggatagagaaatgaaagacgaatacaacgtg
accatcgtggccagggacaacggcatcccttctttgaattacaccaagtcctttactgtg
aaaattctggatgagaatgacaatgcgccacgtttcaccaagactgtgtacatgctacag
gtgcctgagaacaacatccctggggagtatctgggctccatcgtggcccacgacccagac
atcggtcgcaatggcaccgtttcctactccatactgccgtcgcatattggcgatgtttcg
gtgtacacctacgtgtctgttaatcccaccaacggagccatttatgcctcgcgctctttt
aattatgagcaaacaaagtccttcgagttcaaagttcaggctaaagacggaggggcccct
cacatggaaagcacctccacggtcagggtcaacatcctcgacgtcaatgacaatcttccc
gttatcattttacccattctgctgaatgacacagcagaaatcccagtgcctagaaacgtg
ggaatcggatacatcgtgaccactgtgaaagccgtggatcacgaccacggggagagcggc
cacctgacctatgagattacagaagggaacgacgagcacctgtttgagatagacccggtg
gggggcgaggttcgaactgctcacagtctttgggaagaggtggccccagtggttgagctg
gtggtgaagacagaaaatttctcctcggaacccaattatgctggcaacaggcagccattt
gttcaaagctcaacatttaaggatgcagaacgagcgagcctccgagacagtggccatggt
gatagtgaccaggctgatagcgaccaggatactaataaaggctcacactgcgacacgtct
gctagagaagccctcaagatgaaagccacagcagtaaatgcccagccttttgaacaagag
caagacaaatcagcccactgcaccgacgaatgtcgcgcactgggacattctgacagatgc
tggatgccaaagttacgggtaggaagccaagcagacagcgccgataatcgcaccaacctt
ttcatccctgtgggaatggatgccatggttgagacagagatttatggcaccatcagctgc
agcagcagaaaaaccctcagcacgtttggaaaggaacagcgggacagtacaatcctcgtg
gccaatgtcaaaccctacttaaagtcgcagcacgctctgagcccgccgcaacaggagagt
ccatctgcgtctggcagccccaccaagagtagtttgcccctgaacttggccaagcaagag
tccacaggcgagaaggagggcgggtcagacatcagtgcctacggacctccagacggccag
tgctcccccctgcacactgagctggaagagccctcctacctgacctgtgagctcagaccc
aagtccctatcgagcagcctcatccacagctccgtcatcagccaggaatgcggggggtca
gacttcgctcacgaccccaaagactctgccacctga
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