Tetraodon nigroviridis (spotted green pufferfish): GSTEN00026423G001
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Entry
GSTEN00026423G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K07603
collagen type XVII alpha
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
GSTEN00026423G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
LapA_dom
Motif
Other DBs
NCBI-ProteinID:
CAG06170
UniProt:
Q4RZL2
LinkDB
All DBs
Position
18
AA seq
763 aa
AA seq
DB search
SCCRWWKWLLGFLLGLLLLLGLLFGLIALSAEVKRLKKRVNALETITGTASARTSRLASS
PGLNIIDPLESAYVDKSSNGNTLVRSENGINLGSAGQGGRGRGGGGGGGGGGDSGPLGQK
GDSGFPGVPGPPGQMGRPGLEGLRGPKGSTGEPGSEGPPGQRGRDGQMGPPGVVGLPGFG
QKGEPGRPGLPGVAGITGLKGQKGFWGETGQPGPRGDRGIPGMQGLKGDQGERGAEGSSG
VQGPPGIQGPAGLKGSKGAAGETGPMGLPGVRGPPGLPGDAGPPDTTFNKTNSYLVSSDA
VLIPGPPGPPGPPGTPGISGLRGQKGERGEKGDVGEAGISVTRSQSVSSTRTEKLSSEGG
LPGPPGPPGPPGPPGIQGPPGETIQGPPGRKGPPGPPGTGVPGPQGQKGDPGSFVPNSET
FFAGPPGPPGPQGPIGEPGQPGLPGSPGDSSYGGSFRPGPPGQPGPPGPPGRDGIGSESV
DFGQYIAEYLQSGDIRQLLVGPPGPPGPPGFSGLAEDELVEDVANRVISYMQRRGYEGIS
QSGSDLGGSDSMSVGYIIRLLQREDVRKYIAGPPGPPGPPGASGRGSSRFSTQEVAERVL
SMMSERGMINIPGPPGPPGPPGNSFSINFFILKLAGYQALVGPQGPPGPPGIPGTQVEHE
HSVSTRKINYSLSLGDNSRGAMFGLPGPPGPPGLPGPKGEPGVSGFTEGTQNSRDFSSMA
TRVTDYIKWIQDMFSQDLQDLLDHQEYLDKTNGSAPVKMLWML
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
tcttgctgcagatggtggaaatggctgctaggattcctgctcggcctgctcctcctgctc
ggactgctttttggactcattgctttaagtgcagaagtaaaacgcctcaagaaacgagtc
aacgcccttgaaaccatcactggaacggcttcggccaggaccagccgcctcgcttcctcc
cccggcctgaacatcatcgacccgctggagtcagcgtatgtcgacaagagttctaatgga
aacactctggtccgctcggaaaacggaatcaacctgggatcagctggccaaggaggaaga
ggaagaggaggaggaggaggaggaggaggaggaggtgattctggacctctgggacagaaa
ggtgatagtggatttcctggggttccaggtcctcctggacagatgggtcgcccaggattg
gaaggactaagaggaccaaagggcagcacaggggaaccaggttcagagggaccaccggga
cagaggggtagagatggacagatgggcccccctggagtggttggactacctgggtttgga
cagaaaggtgaaccaggacgtccaggcctacctggagttgcaggaatcacaggcctgaaa
ggacaaaaaggcttctggggagaaacgggacagccaggaccaagaggagatcgaggaata
cctggtatgcaaggactcaagggagatcagggagaaagaggagcagaaggatcatctggt
gtacagggaccacctggaatacaaggccctgctggactaaaaggatctaaaggagctgct
ggtgaaactggcccaatgggccttccgggtgtgagaggaccaccaggacttccaggagat
gctggtccaccagataccacttttaacaaaacgaattcttatttagttagctctgatgct
gtgcttatccctggaccacctgggcctcctggccctccaggaacccctgggatttccggt
ctccgtggtcaaaaaggagaacggggagaaaaaggagacgttggtgaggctggtatcagt
gttaccaggtcacagagcgtcagctccacaagaacggagaagctttcttcagagggtggc
ctgcctggtccaccaggacctccagggccaccaggacctcctggcattcaaggtcctcca
ggtgagaccatacagggtcctccaggacgcaaaggtcccccaggaccaccaggtacaggt
gttcctggacctcaaggacagaaaggagatcctggtagctttgtgccaaactcagaaacc
ttttttgctggaccaccaggacccccaggcccccagggcccaattggtgaaccaggtcaa
ccaggtcttcctgggagtcctggagattcaagttatggtggctcattcagacctgggcca
ccaggccaaccaggcccaccaggaccacctggaagagatggaattgggtctgaatcagtt
gactttggccagtacattgcagaatacctacagagtggtgacatcaggcagcttctggtt
ggacctcctggaccacctggtcctccggggttttctgggcttgctgaagatgaattggtt
gaagatgtggccaacagagttatttcttacatgcagaggagaggatatgaaggcataagt
caaagtggttctgatctaggaggttctgattccatgtctgtcggttatataattaggctg
ttgcagcgagaagatgtaagaaaatatattgctggtcctcctggacctccaggaccccct
ggagcttcaggtcgtggtagctctagattcagcacacaggaagtggctgagcgtgttctc
agcatgatgagtgagagaggtatgataaacattccaggacccccaggaccacctgggcct
ccaggaaactcattttcaattaacttttttattctaaaactagcaggttatcaggcactt
gtgggtcctcaaggacctcctggtcctccaggaatcccaggcacacaagttgagcacgaa
cacagcgtttcaacacgcaaaataaattattctctctctctaggtgacaattcaagggga
gcaatgtttggacttcctggtcctccaggcccccctggactcccaggaccaaagggagag
cctggtgtatccggcttcacagaagggacacaaaatagtcgagacttctcaagtatggct
acgagagtaacagattacatcaaatggattcaggatatgttctcccaggacctccaggac
ctcctggaccaccaggaatacctggacaagaccaatggctcagctcccgtgaaaatgttg
tggatgttgtga
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