Tetraodon nigroviridis (spotted green pufferfish): GSTEN00026506G001
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Entry
GSTEN00026506G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K08873
serine/threonine-protein kinase SMG1 [EC:
2.7.11.1
]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
GSTEN00026506G001
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tng01001
]
GSTEN00026506G001
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tng03019
]
GSTEN00026506G001
Enzymes [BR:
tng01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
GSTEN00026506G001
Protein kinases [BR:
tng01001
]
Serine/threonine kinases: Other
PIKK family [OT]
GSTEN00026506G001
Messenger RNA biogenesis [BR:
tng03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
GSTEN00026506G001
mRNA cycle factors
Common to processing body (P body) and stress granule
GSTEN00026506G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMG1
PI3_PI4_kinase
FATC
PDCD9
DUF7822
TssO
Motif
Other DBs
NCBI-ProteinID:
CAG06224
UniProt:
Q4RZF8
LinkDB
All DBs
Position
3
AA seq
2188 aa
AA seq
DB search
MLLLPYSSKLLWELRQDAATCLGLLCTVLSYEAESIFKWLFLKLTSSTRDEVKLLYLMAT
YHALEAAGERKAFSHIMQMVMTHLQSILENVDTPELLCQSVKCILQVAHCYPHVFSINFR
DTVDILVGWHIDHTQKQSVTQQVSGHFLFHFFSYFSILFFSNDVFGIFQAVSSNVLACLH
LPYLLAYKTGIFPRTFGLKLGGKNKQQGHVRNSTKERLTLKRMCPFPTCVCVCVVLLRPP
CLFIFLPSFFPPLPLSAAAPCGGIPPGNECVGVLLASVEPTGQLMEAVLVYGLDQLDCCQ
ACSSEYNLSVLILLTVTVDQINTKLPASFVEKLLAPKSKLLQLRFHRDKEVISAVHGVYQ
ALLSLKNIPTLEAAYKMVLGEIACALSSLTSALNSCGVDPAHNSSLCSSIQHPSFASLTL
PLDNAEFTLIFNLSTLTTIGNTKNSLIGVIFTLLSQNLLLVHSDLAVYYPAIQYAVLYTL
YSHCTRHDHFISSSLSSSPSLFDGAVISTVTTATKKHFSTLLGLLGGLLVKEHLYFETRK
LLLTWAQEICVLMKKSDTYSPLFSLSTFNKFCRGLLSNALNEDQSICLQTCHCIQVLSSS
LSNELLQSCVDVCRVQLVHSAVRVRQAFGKLLRTIPLDIALSNQCHPRMRDISLAVRHHM
SRAPSSTFHPQDFSDLISFILYGTLHRGGVLKRFFYTNRQTCQDWLTRIRLALMRVGLLS
GKPAVTIRHGFDLLTEFKNSSTQGPEVEVLLILLAEALCELHCPEAIQGLAAWSLFTTGR
SLSWLSSVALQAEGSVSGSINLRTDLNYIQALSRFEEGDLAECATQLELLPGEDYSSLSY
SKDKLDGHLTELCLTAVKFARKKGNIVLASRLLRKCGSGSNENEQEDDLSLTFRLLTLDG
TLGEKWGPELQIEKAKVLRAAVNVGVGEPDFVLGQLYQLSTYLAPEMAKSWAALASWAYR
WGRKDEDIALQQDDDEDDMVDVIWRQLTGSCPWLADMSQAVSDGLIRVWRHVVDRIFGLY
RVSCQAYFTFLKLNVGQGSSPSFFPVSIIQRHTSGKAYAACCVEWPKTPRILYSILPLWA
HYPLEQKPKMQIMMSLQQRAQKRASYLLHLDEISPRLLSMTKTEMALPGEVSASDAITIQ
SIGNTITILPTKTKPKKLFFMGSDGRNYPYLFKGLEDLHLDERIMQFLSIVNTMFTKINQ
QEQPHFHACHYSVTPLGTRSGLIQWVDGATPLFGLYKRWQQREAVLQAQKSYARSTAVMS
MVGYIIGLGDRHLDNVLIDMTTGEVVHIDYNVCFEKGKSLRVPEKVPFRMTHNIETALGV
TGVEGIFKLSCEQVLQIMRRGRETLLTLLEAFVYDPLVDWTAGGEVGFAGAVYGGGGQQA
ENKQSKREMERDITRSLFSSRVAEIKVNWFKNRDEMLAVLPQVEEAVEEYLVLQELLCQG
GKLQEKLQEEIAFLEGAENHPDHLILTLEQRYEILFAPQPSTAICQFLSSVELTLQHQIS
ETNDRVMRQAERLKAEGTTVSACEEQVQEIEHCITGFLPTIQVVYLANAVYTCLQELNTN
FRQIIFPEALCCMIKGEPTLESMLVEIEQLVEQSSDGLGLQGMVNNLQATTCFDKDGHNH
LLNIIRLIQPRNMEEPGQDTPKMSPGQMLLVAFDGMFTQLENAFAQLTDKVEAKDFGVES
KVLCKICFNMCLVLKMKVSLDELCKKAVEHSLASGRISQLLLNRATVLASSYDTAWKKLD
LLRRLDAHLEAAKASLQRSQLHVAMFQWQHEDILGPSNQPLSVSIPPRSIILSNMKKKLY
KLSQDEGAIVAVQEKLASLEASIEQRLKWAGGANPALAPVLQDFEMTITERRAIVARENQ
RTSQVTFLCSTILNFEGLRTRSAEALNMDAALFELLKRCQQTCSFAAKFSSSVSPIELQL
LHRLSPVLDLPIGSPDWLSCAQRQLEEQLNVEQNTRVEREQQLEVCAETLQVLVDSIKTI
LSHHNRQLADVKHLLRAMAKDEEAALADGEEVVYEGSVRQFLLEYKAWQDNNQLVLFTVV
QASGQPRSQEQLELLEEIPDTLKELYSQSERCTGLKTQPDSVSQNARKALPRNFGTPTDT
PPSTLVMNSKALNASPKRAIRDPKTGRAVQERNSYAVSVWKRVKAKLEGRDIDPNRRMSI
TEQVDFVIKEATNLDNLAQLYEGWTAWV
NT seq
6567 nt
NT seq
+upstream
nt +downstream
nt
atgctgttgttgccatacagtagtaagctgctctgggagttgcgtcaggatgcagccact
tgtcttggtctactctgcacggtacttagctatgaggctgagagcatcttcaaatggctc
tttctcaaattaacttcgagcactcgtgatgaggtgaagctgttgtacctcatggcaaca
tatcacgctttggaggctgctggagaaagaaaggccttttcccatatcatgcagatggtg
atgactcatttgcagtccattctggagaatgttgatacaccagagctactttgtcagagt
gtgaagtgtattcttcaggtggcccactgttacccgcatgtgttcagcatcaactttaga
gacacagtggatatattggtgggctggcacatagaccacactcagaagcagtcagtcacg
cagcaagtctcaggtcattttctttttcatttttttagttatttctctatcctttttttc
agtaatgatgtttttggtatttttcaggccgtcagttcaaatgttctagcatgtttacat
ctaccgtatttactcgcttataagacggggatttttcctcgaactttcgggctcaaattg
gggggcaaaaataaacaacagggacacgtacgcaacagcacgaaagaaagactgactttg
aaaagaatgtgtccgtttccaacttgcgtgtgtgtgtgcgtcgtcctgctccgccctcca
tgtctcttcattttccttccctctttttttccccccctccctctcagcgctgcagctcca
tgtggtggaattccaccaggaaatgagtgtgtgggtgtgttgctagccagtgtggaaccc
actggccagttgatggaggctgtcctggtctatggcctggaccagttggactgctgccag
gcctgcagctcagaatacaacctttcagtgctcatcctcctcactgtgacagtggaccag
atcaacacaaagctccctgcatcattcgttgaaaagttgctggctccaaaatccaagctg
ctgcagctgcgttttcatagagataaagaggtgatttcagctgttcatggtgtatatcag
gcactgttaagcctgaagaatattcctactcttgaagcggcatataaaatggtattgggt
gagatagcgtgtgctctctccagcctgacctcagcactgaattcctgtggtgtggatcct
gcccacaacagcagtctctgctccagtatccaacatccttcttttgcgtctctcaccctt
cctttggacaatgctgagtttaccctcattttcaacctcagcacccttacaactattggc
aacaccaagaattctctgattggggtgattttcacactgctcagtcaaaatcttttgttg
gtccactctgacttggcagtttactaccccgccatccagtatgctgtactctacacactc
tactcccactgcacaagacatgatcacttcatctcatccagcttgtcgtcttctccatca
ctatttgatggtgctgttatcagcactgtgaccacagcaacaaagaaacacttcagcaca
cttttaggcctgcttggaggtctcttggtgaaggagcacctctattttgagaccaggaag
ctgctgctgacctgggctcaggaaatctgtgtactcatgaaaaagtcagacacctatagc
ccccttttctctttgtccactttcaacaagttttgcaggggtctcctttccaatgctcta
aatgaagaccagagtatttgtctccagacctgtcactgcatacaggttctgtcttcatct
ttgtccaatgagctgttgcaaagttgcgtggatgtctgcagagtacagttggtccactca
gcagtgagagtaagacaggcctttggcaagctcctcagaaccattcctctggacattgcc
ttaagtaaccagtgccaccccagaatgagggacatttcactggctgtccgccaccatatg
agtcgagcaccaagcagcacctttcacccccaggacttcagtgacctcattagttttatt
ttgtatgggacactgcaccgtggcggagtattaaaacgtttcttttacacaaaccgtcag
acatgccaagattggctgacaagaatccgtcttgctctcatgagagttggtcttctttct
ggcaaaccagcagtaaccattcgccatggtttcgatttgctcacagagtttaagaacagc
agcactcagggtccagaggtggaggttcttctgatattgttggcagaagctctgtgtgag
ctacattgtcctgaggccatacagggcctggcagcatggagccttttcaccaccggtaga
agtctgagctggctgtcatcagtcgccctacaggctgaaggaagcgtttcaggaagcatc
aatttgaggacagatctaaactacatccaggctctgagccgctttgaggaaggtgatctt
gccgagtgtgcaactcagcttgagctgctgcctggagaggactacagctcactctcttac
agcaaagacaaactagatggccacctaacggagctgtgtttgactgctgtcaaatttgcc
aggaaaaaaggcaacattgtcctagcctcccgtttgctcagaaagtgcggcagtggatcc
aatgagaatgagcaagaggatgatctgagcctcacgttcaggctactgacgctggatggc
actctgggggagaaatggggaccagagctacagatagaaaaagctaaagttctgagagct
gcagtgaatgtaggtgttggagagccagactttgttttgggtcagctctaccagctgtca
acttacctggctccagagatggcaaagtcctgggcagccctagctagttgggcctatcgc
tggggtcggaaggatgaagacatagccctccagcaggacgatgacgaagatgacatggtg
gatgtgatctggcggcagctcactggctcatgcccctggcttgcagatatgagccaggct
gtttcagatggtctgatcagggtttggaggcacgtggtggatcgcatctttggcctctac
agagtctcatgccaggcctattttacgtttttaaaactcaatgttggacagggatcatcc
cccagcttttttcccgtctcaatcatccagaggcatacatccggcaaagcatatgcagct
tgctgtgtcgagtggcccaagactccccgcatcttgtactctatcctgccattgtgggct
cactatcctttggaacagaagcccaaaatgcagatcatgatgagcctgcagcagcgagcc
caaaagcgagctagctatttgcttcacctggatgagatcagtcctcgtcttctgtcaatg
accaagacggaaatggccctgcctggtgaggtgtctgcatcagatgccataaccatacaa
agcataggcaacaccattacgatcctaccaaccaaaaccaagcccaaaaagctcttcttc
atgggttcagatggacgaaactacccatacctctttaaaggtttggaggatttacatttg
gatgagcgcataatgcagttcctgtcaattgtcaacaccatgttcaccaagattaaccag
caggaacagcctcatttccatgcttgccactactctgtcaccccccttggaaccaggtca
ggacttattcagtgggtggatggagccacgccactgtttggcctctacaaacgctggcag
caaagggaggctgtgctccaggctcagaagtcctatgccaggtccactgctgtcatgtca
atggttgggtatatcatcggccttggtgaccgtcacctagacaatgtgttgattgacatg
accaccggagaggttgttcacatcgactacaatgtatgctttgaaaaagggaagagtcta
cgagtgccagagaaagtcccattcaggatgacccacaacatagagactgctctgggtgtc
accggtgtggagggcatcttcaagctgtcctgtgaacaggttcttcagataatgcgccgt
ggaagagagaccctgttaactctattggaggcctttgtctatgatcctcttgtggactgg
actgctggtggggaagtaggctttgccggtgctgtatatggaggtggaggccagcaagct
gaaaacaagcagagcaaaagggagatggagagagatatcacacgctcccttttctcatcc
agggtagcagagattaaggtgaattggtttaaaaatcgtgatgaaatgctggcagtattg
ccacaagttgaagaggctgtggaggagtacctggttctgcaagagctgctctgccaggga
gggaaactgcaagaaaaacttcaagaagaaattgctttcttggaaggagcggagaaccat
cctgaccatctgatccttaccttggagcaaagatatgaaatactgtttgcccctcaacct
tctactgctatttgtcagttcctgtcaagtgtggagttgactttgcaacaccagatttct
gaaaccaatgatcgtgtgatgcgccaggcagagcgcctcaaagctgagggaacaactgta
tcggcgtgtgaggaacaagttcaggagattgagcactgtattacgggcttcctccccact
atccaagtggtttatctggctaacgctgtatatacctgcttacaagagctaaacaccaac
ttcagacagatcatcttcccagaagctttgtgttgtatgataaaaggagagcctactctg
gagtctatgttggtagaaattgagcagctggtggagcagagctctgatggtcttggactc
caaggaatggtcaacaatctgcaagctactacatgttttgataaagatggacacaaccat
ttactcaacattataaggctaatccagcctcggaacatggaagaaccaggccaggacaca
ccaaagatgtccccgggacaaatgttgttggtagcctttgatggaatgttcacccagcta
gagaatgcatttgcacagctcacagacaaggttgaggccaaagactttggtgtcgaaagt
aaggtattatgtaaaatctgctttaacatgtgccttgttttgaaaatgaaggtctctttg
gatgagctttgtaagaaggcagtggaacatagcctggcttcaggtcggatttctcagctg
ctgttgaacagagccactgtgctagcctcctcctatgatacagcctggaagaaactagac
ctgttaagaaggctggatgcccacctggaggctgctaaagccagtctgcagagaagccag
ctgcatgttgcaatgtttcagtggcagcatgaggatattctgggtcccagcaatcagcct
ctaagtgtaagcattccacctcgctccatcattctcagcaacatgaagaaaaaattgtac
aagctgagtcaagatgaaggagccattgttgctgttcaggagaaactggcatcgctggag
gccagcattgagcaacgtctaaagtgggcaggtggagccaatccagcactggccccagtc
ttgcaggactttgagatgaccatcactgagagacgtgcaattgtggccagagagaaccag
cgcaccagccaggtcacatttctatgctcgactatccttaattttgaaggacttcgcact
cgatcagctgaggccctgaatatggacgctgcactctttgagttgttaaaacgttgccag
caaacctgctcctttgctgccaagtttagcagcagcgtctccccaattgagctccagctg
ctgcacagactgagtcccgtcctggacctgcccattggcagccctgactggctgagctgc
gcacaaaggcaactggaagagcagcttaatgttgagcaaaacacccgggtagagcgggag
cagcagctggaggtctgcgccgagacgctgcaggttctggtggattccataaagaccatc
ttgtcccatcacaaccgccagctggctgatgttaagcacctgctgagggccatggctaag
gacgaggaggcagctttggcggacggcgaagaggtggtatacgagggaagcgtgcgtcag
tttctgctggagtacaaagcatggcaggacaacaaccagctagtcttattcacagtagtc
caggccagtgggcagcctcgcagtcaggagcagctcgagctgctggaggagatccctgac
acactgaaggaactgtactcccaaagcgagagatgcactgggttaaagacccagccagac
tcggtttcgcagaatgctcgcaaggctctgccgcgaaattttggaactcccactgacacc
cctcccagcaccctcgtcatgaacagcaaagctctcaacgccagcccgaagagagccata
cgggaccccaaaactggaagagctgttcaggagagaaactcctatgcagtcagtgtgtgg
aaacgagtaaaagccaaactggagggcagagatattgatcccaacagaaggatgagcatc
actgagcaggtggactttgtcatcaaggaggctacaaatctggacaaccttgctcagcta
tatgaaggctggactgcctgggtgtga
DBGET
integrated database retrieval system
