Tetraodon nigroviridis (spotted green pufferfish): GSTEN00026520G001
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Entry
GSTEN00026520G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K06765
deleted in colorectal carcinoma
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
GSTEN00026520G001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tng04515
]
GSTEN00026520G001
Cell adhesion molecules [BR:
tng04515
]
Immunoglobulin superfamily
DCC/UNC5 family
GSTEN00026520G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
ig
Ig_2
V-set
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_VIN3
C2-set_3
C2-set_2
Interfer-bind
Ig_5
Ig_4
Fn3_R-PTP-O
fn3_SORL1
Ig_PDGFR_d4
C1-set
Sp38
V-set_CD47
Motif
Other DBs
NCBI-ProteinID:
CAG06233
UniProt:
Q4RZE9
LinkDB
All DBs
Position
undetermined
AA seq
735 aa
AA seq
DB search
GPLKAVTPTKSVSSYLGDTALLECKVSGEPSPAIRWQKNREDLPVTSEPDSQLAMLPSGS
LQVSRVQPPDSAMYRCLADNPGSSRTGADAELRVLPEPGLPRSLQFLQRPSRVTALLGSD
VVLECSASGYPTPSIQWRKGEELIQSWSKKYSLLVGSNLIIRSVTDDDSGSYSCTAANRN
QNISATAELSVLVPPQFLNYPSNTYAYESTDVELECAVTGNPPPTVRWMKNGEEVIPSDY
FQMVDGSNLQILGLVKSDEGFYQCVAENAAGSSQAMAQLLLREPVSPSPGAALPSAPRDL
VPVLVSSRFVRLSWRPPEESGGGVQTYGIYYSQDGVESFIFYLHPNRHTSGADLGGVDHC
VLLLLAYLAQGLLERSGDRASPWERSVNVSEPESLELMVSNLKPEETYSFRVIAYNDVGP
GESSAPLKITTKPDLQVPSRAESLRLVALSPTSVQVSWEPPSHPNGPILGYRLLWTESPS
GKEQSVEVNSLTYKMDGLNKFTEYTVRVLALNRYGPSPATEAAGVTTHSDVPSAPPQNIT
LEVVLSRSIKVLWQPPPRSSQNGVITAYKIKYRKTGRRGDKEAIEPNNFWYLFTGLEKGS
QYSFQVAAMTANGTGPFSDWFAAETPENDLDESQVPDQPSSLHVRPLPHSIIMSWTPPLS
PNILVRGYIIGYGVGSPYAETVRVDSKQRYYSIENLEPSSHYVISLKAFNNAGEGIPLYE
SAVTRSLTGERIITR
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
ggtcctctcaaggctgttactcccaccaagtctgtgtcgtcgtacctgggcgacacagct
ctgctggagtgtaaggtctcgggtgagccgtcgcctgcgatccgctggcagaagaaccga
gaagacctgcccgtgacctcggagcccgattctcagctagcgatgttgccgtctggctcg
ctgcaggtcagccgagtgcagccccccgactcggccatgtatcggtgtttggcagacaac
ccgggcagcagcaggacgggggctgacgcagagctgcgagtccttccagaaccaggtctg
cctcgaagtcttcagttcctccagcgtccctccagagtgacggctctgctgggatcagac
gtggtgctggaatgttctgcctctggatacccgacgccgagcatccagtggaggaaaggg
gaggagctcatccagagctggagcaagaagtactccctgctggtcggcagtaacctgatc
atccggagcgtcaccgacgacgactcgggcagctacagctgcacggccgccaacaggaac
cagaacatcagcgccacggcggagctcagcgtcctcgtgcccccccagttcttgaactat
cccagcaacacgtacgcctacgagtccacggacgtggagctggagtgtgctgtcacagga
aaccccccaccgaccgtccgctggatgaagaatggagaagaagtcatacccagcgactac
ttccagatggtggatggaagcaacctgcagattctgggtttggtgaagtcggacgaagga
ttctatcagtgtgtagcagaaaatgctgctggcagctcgcaagccatggctcagctgctg
ctccgagagccagtgtcccccagcccaggcgctgccctcccctctgccccccgtgacttg
gtccctgtcctagtgtccagccggttcgttcgactcagctggcgccccccagaggagagc
ggcggtggtgtccagacctatggcatttattactcccaggacggagtcgagagcttcatc
ttctaccttcatcccaatcgacacaccagcggcgctgatcttggtggtgtcgaccattgt
gtcttgctcctcttggcatacctggctcaggggcttttagagcgcagtggggacagagca
tctccttgggaacgctcagtgaacgtgtcggagcccgagtctctggagctgatggtgtcc
aacctcaaaccagaggagacctacagcttcagggtcatcgcttacaacgacgtggggccg
ggagaaagttccgcacccttgaagatcaccaccaaacctgacctccaggttcccagcaga
gcggagtctctccgcctggtggctctgtcccccacctcagtccaggtgagctgggagcct
cccagtcaccccaatggccccatcctgggttacagactgctttggactgagagcccctct
ggcaaggaacagagtgtggaggtgaactctctcacctacaagatggatggactcaataag
ttcacagagtacaccgttcgagtgctggcgctcaatcgctacggacccagtcctgccaca
gaggccgccggcgtcaccacccactccgatgtgcccagcgctccccctcagaacatcacc
ctcgaagttgtcctgtcgaggagcatcaaggtgttgtggcagccgcctccacgcagctcc
cagaacggcgtcatcactgcctacaaaatcaagtacaggaagacaggtcgccgtggcgac
aaagaggccattgaacccaacaatttctggtacctcttcacaggtctggagaaaggcagc
cagtacagcttccaggtcgcagccatgacggccaacggaacgggaccgttcagtgactgg
ttcgccgctgagacgccagagaacgacttggacgagagccaggttcccgaccagccgagc
tctctgcacgtccgcccgctgccccacagcatcatcatgtcctggacccccccgctgagc
cccaacatcctggtccggggctacatcatcgggtacggcgtgggcagcccctacgctgag
acggtccgggtggacagcaagcagagatactactccatcgagaacctcgagcccagctcc
cactacgtgatttccctgaaagcgttcaacaacgccggagaaggaatcccgctgtacgag
agcgccgtcacacgatccctgacaggtgagaggataataacacggtaa
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