Tetraodon nigroviridis (spotted green pufferfish): GSTEN00026690G001
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Entry
GSTEN00026690G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K13132
gem associated protein 4
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tng03041
]
GSTEN00026690G001
Spliceosome [BR:
tng03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
GSTEN00026690G001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Edg1
Motif
Other DBs
NCBI-ProteinID:
CAG06361
LinkDB
All DBs
Position
16
AA seq
1070 aa
AA seq
DB search
DSAILQGAFVLADKLCRPSTLSSIQKADWSRAGQPVLEALKEIGVNPTTEGTWTKKLVCV
LWLKLWCKEDGENIEMAWRENPFFSLQSGLPSINHVVLFEIVKSLAAAQTFSRFLLLLSP
SQTCTELTKLVEHVKSSPTTEGDIQFFLDVWWELWKCRVEEKKGDDTETMFVKQIECLTP
TSSGLSPNAKRLKLDVADETTSLPTPDVLHCLLHALKDIQDHVSSEDLCLQALSTSLDAL
YTCFLVDRAVPLPPEARVQILSKVASIKGGDERKLDAELIKEAQRDLQASHALSPFQPVM
TLRDALNIVTTSARFWESRGLLGVSVSSQPSLAAFKLEQSTNRVLTALSGAKVGAESEGK
ELQRLLESLSFPAVDCAPELTARVAAIYISQRLDGYQDMAALFAGEDSWAASEELWMECV
EKNQAAFQQRDALKRLSLTLVNLLTGENVNVNRCRKLMKVTADVFSALPLKSKNRALADM
VALSSRGFFGTASPPSLSDKFEQELNMAFNCIIQGGGGASPGATQRNLDTAVSLVARVAY
QNPEAALRSCCHSAVFNKDAFTLMANILQQLPGLGGQQEGEAEAEEEEEVEEGSRGGLLS
ACLQETIRAKSLSPNEKLQLLKFVELLMKPVRVDEDEERSFLPPREVVYSFVLPYLSPLE
GRRADIELALQLLGAALSAEAPPDVSPHWVMECSPFPLLYVLSQLLNQTLRFWEQPPQDA
VFECSMETKELLVEVLTSLGTLVGAEVAAAPGSWSRALSWLYSRIEELDWTVRFHLKPVL
GEHFKNEVPSSLLTVCDLPEQEWCGLDLPQYGQGTGLLAWMECCAVSDSLQSTMTSHLSV
DQQQVDHVLLFSKGLLLALTQTLPWCSLSQWARLLRVLRELIGAGCLYVPFSLEYVEYLP
LLDLRRFACELRLSVFMLRAFQLLCGSSCSHWLSLDGWAHVGRLYSRAVREMLNLVTAKL
PLPRDPENSSVVNKESQMEEEETVPGQEVLFVLSQLFCHVQHVQAMMPEGQCEPLFLSSL
EILSHYEATMARFPESSSPFESATTRHFFTTITDNLENAEMKAVLQQKIS
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
gactcagctattcttcaaggggctttcgtgctggccgataagctatgtcgcccttcaacg
ctgtcctccatccagaaagctgactggagcagagcgggacaaccagtcctggaggctctg
aaagaaattggtgtgaatcccaccaccgagggaacttggacaaagaaattagtttgcgtt
ttgtggctgaaactttggtgcaaggaggatggagagaatatagagatggcttggagggaa
aatccttttttctctcttcagagtggccttcccagtatcaaccatgttgtcctatttgaa
attgtgaagtcactggcagcggcccagaccttctccaggttcctgttacttctgtctcct
tcccagacctgcacggagcttacaaagcttgtggaacacgtcaaaagtagtcccacgaca
gaaggcgatatccagttttttctggatgtgtggtgggaactgtggaaatgcagagttgag
gagaaaaagggagatgatacagagacaatgtttgttaaacaaattgaatgtctgactcct
acatcttcaggtttatctcccaatgctaagagattaaagctggatgtagcagatgaaaca
acatctttaccaacacctgatgtcctgcactgtcttcttcatgcacttaaagacatacaa
gatcacgtatcatcagaagacctttgccttcaggccctctccacgtctcttgatgctctt
tacacctgcttcctggtggatcgagcagttccacttccacccgaagcaagggtgcaaatc
ctgtccaaagttgccagcattaaaggaggggatgagaggaagctggacgctgaactcatt
aaggaggctcaaagggacctgcaggcctctcacgccctgtcaccttttcagccagtcatg
acgcttcgtgacgccctgaacatcgtaaccacaagcgctcggttctgggaaagccgcgga
cttctgggcgttagcgtcagcagtcagcccagccttgctgcatttaaactagaacaaagt
accaacagagtcctgaccgctctttctggagccaaggtgggggcagagagcgaggggaag
gagctgcagaggcttctagaatccctttccttcccagccgttgactgcgcccccgagtta
accgccagagttgcagcaatctacatcagccagcgcttggacggctatcaggacatggca
gcgctgttcgccggcgaggacagctgggctgctagtgaggagctctggatggagtgtgtg
gaaaagaaccaggctgctttccagcagcgagacgcgctgaagcgactgtctctgaccctc
gtcaacctgctcaccggagagaacgtcaacgtgaaccgctgccggaagctgatgaaagtc
acagcagacgttttctctgctcttcccctgaaaagcaagaaccgagcgttggctgacatg
gtagcgctctccagcaggggtttctttgggaccgccagtcctccttctctcagtgacaag
tttgaacaagagctgaacatggccttcaactgtattatacaaggagggggcggggcctcc
cctggagcgacccaacggaacctggacaccgccgtctccttagtggccagagttgcttac
cagaaccccgaggcggctctcaggtcgtgttgtcattcggccgttttcaacaaagatgct
tttacgctgatggcaaacatcctgcagcagctgcctggactgggaggacagcaggagggc
gaggctgaagcggaggaggaggaggaggtggaggaggggagccgcggtggtttgctctct
gcctgtcttcaggaaaccatccgggccaaatctttgtcccccaatgaaaaactgcagctc
ctgaagttcgtcgagctgctgatgaagcctgtgagggttgatgaagacgaggagcgcagc
ttcctgccaccgcgggaggtcgtgtacagcttcgtcctgccgtacctctcccccctggag
gggcggagagccgacatcgagctggcgctgcagctgctgggcgccgcgctctcggcggag
gccccaccagacgtgtctccacactgggtgatggagtgctccccctttcctcttctctac
gttctgtcccagctgctcaatcagacactcaggttttgggagcagcccccgcaggacgct
gtgttcgagtgttccatggaaaccaaagagctgctggtcgaggtgctgacgagtctgggg
acgctggtgggggccgaggtggccgcagcccccggcagctggtccagagctctctcctgg
ctttacagtaggattgaagagctggactggacggtgcgtttccacctgaagccggttttg
ggggaacactttaaaaatgaggttccctcgtcgctgctgactgtgtgcgatctacctgaa
caggagtggtgtgggttggatctgccccagtatggccagggcactggtcttcttgcctgg
atggaatgctgtgctgtgtcagactccctccagtccaccatgacgtcccatctctctgtg
gaccagcagcaggtggaccacgtccttctgttcagcaaaggcctgctgctggctctgacc
cagaccctgccctggtgctccctgtcccagtgggcccggctgttgcgcgtcctgagggag
ctcatcggcgcaggctgcctctatgttcctttctctctggagtacgtggaatatctgcct
ctgctggacctgaggaggtttgcgtgcgagctgcgcctgtccgtgttcatgcttcgggcc
tttcagctgctgtgtggatccagctgctcccactggctgtcgctggacggctgggcgcac
gtcggcaggttgtactcccgcgccgtgagggagatgctaaacttggtgacagccaagctg
cctcttcccagagacccagaaaactcctctgtagtaaacaaagagtcccagatggaggaa
gaggagacggttcctggtcaagaagtcctttttgtactcagccagctcttctgccatgtc
cagcatgtccaggcgatgatgccggaaggccagtgtgagccgttgttcctgtccagtctg
gagatcctcagtcactacgaggccaccatggctcgtttcccagaaagcagcagcccgttc
gagagcgcaacgacccgacacttcttcaccaccatcacagacaacctggagaacgcggag
atgaaggcggtgttgcagcagaagatctct
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