Tetraodon nigroviridis (spotted green pufferfish): GSTEN00026918G001
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Entry
GSTEN00026918G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04080
Neuroactive ligand-receptor interaction
tng04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
GSTEN00026918G001
04082 Neuroactive ligand signaling
GSTEN00026918G001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tng04040
]
GSTEN00026918G001
Ion channels [BR:
tng04040
]
Ligand-gated channels
GABA-A
GSTEN00026918G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF5874
Motif
Other DBs
NCBI-ProteinID:
CAG06524
UniProt:
Q4RYK8
LinkDB
All DBs
Position
3
AA seq
417 aa
AA seq
DB search
TNDNSTVFTRILDGLLDGYDNRLRPGLGENVTEIKTNIFVTSFGPVSDTEMEYTIDVFFR
QSWKDERLCFKGPMEMLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKDDGTL
LYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPVSEVVYTWTKGAAKSVVVAEDGSR
LNQYHLIGQTAGTEDIYTSRGQYTVMMAHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWL
NRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATV
NYFTKRSWAWDGKKALEAQHPKKRDPMVLSKKPNNVCSAGINYTANLTKDMSISTISNTT
SVQLRAAETKMVDPKKTYNSVSKIDKMSRIVFPVLFGTFNLVYWATYLNREPVVKGV
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
accaacgacaacagcacggttttcaccaggatcctggacgggctcctcgacggttacgac
aaccggctcaggcctgggcttggcgagaacgtgacggaaatcaagacgaatatatttgtt
accagcttcggcccggtgtctgacacggagatggagtacaccattgacgtgttcttccgt
cagagctggaaggatgagcgtctttgcttcaaaggtcccatggagatgctgcctttgaac
aacctgctggccagcaacatatggactcctgataccttcttccttaatggcaagaaatcg
atcgctcacaacatgaccacgcccaacaagctgctgaggctgaaggacgatggcactttg
ctttacaccatgagactgaccatatcagcggaatgtcccatgcagctggaggatttcccc
atggacgcgcatgcctgtcctctcaagtttggcagctatgcttatccggtgtccgaggtg
gtctacacctggactaaaggagctgccaaatccgtggtggtggccgaagacggctctcgc
ctcaaccagtaccatctgatagggcaaacagccggcacagaggacatctacacgagcaga
ggacagtacacagtgatgatggcccacttttacctgaagaggaagattggatattttgtc
atccagacgtacatgccctgctttatgaccgtaatcctgtcccaggtgtcattctggctc
aacagagaatcggtccccgcgaggaccgtttttggggtgaccaccgtgctgaccatgacc
acgctcagcatcagcgccaggaactcccttccgaaggtggcctacgccaccgccatggat
tggttcatcgccgtctgctacgcgtttgtcttttctgccctcattgagttcgccacggtc
aactacttcactaagaggagctgggcctgggatggcaagaaggcgctggaagcacagcac
cctaagaaacgcgaccccatggtgctgtccaaaaagcctaacaacgtctgctcggcgggc
atcaactacaccgccaacctcaccaaggacatgtccatctccaccatctccaacaccacg
tccgtgcagctcagggctgccgagaccaagatggtggaccccaagaagacctacaacagc
gtcagcaagatcgacaagatgtcgcggatagttttccccgtcctgtttggaaccttcaac
ctggtctactgggccacgtacctgaaccgagagccggtggtgaagggagtg
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