Tetraodon nigroviridis (spotted green pufferfish): GSTEN00027026G001
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Entry
GSTEN00027026G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04020
Calcium signaling pathway
tng04080
Neuroactive ligand-receptor interaction
tng04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
GSTEN00027026G001
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
GSTEN00027026G001
04082 Neuroactive ligand signaling
GSTEN00027026G001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tng04040
]
GSTEN00027026G001
Ion channels [BR:
tng04040
]
Ligand-gated channels
Glutamate (ionotropic)
GSTEN00027026G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
NMDAR2_C
SBP_bac_3
ANF_receptor
DUF7432
Motif
Other DBs
NCBI-ProteinID:
CAG06594
UniProt:
Q4RYD8
LinkDB
All DBs
Position
2
AA seq
960 aa
AA seq
DB search
MAFSPWPPLFLLLLLLASSPLPLPARPLLLHPSINVAVVFSGSSYQTEVRGRLSGENFVD
LPVVVSPVTVLVNDTNPRDLLTHLCDTMATEKLHGVVFEDDVGSGAGAQVAEVAQILDFL
STQTALPIVGISGGSAIVIPYKVQSNLPASSAWEAEGSSFLQMGASLEQQVLCMFKMMEE
YDWGEFAVITSLLPGYDTFVDIVETYTDTSYFLWNVQDVLSLEMSVGASEAKTKRLLQQL
DSQVLLAYCSYDEAQFLFRQAAEVGLVGPGYIWIIPSLAVGNPNSPPPDSFPVGVIGVIT
DQWRKSLRQRVREGVAIVAKGAESFKKQHGFVPEGHGDCTKPAKHSSDNNTLFRHMLNVT
WERKDLSFNNQGFLSNPSMVIIALDRERIWDKVGTYARGILQVRYPVWPRYGSFLDKVSD
DRHLTVATLEEHPFVMVENVDPGTGTCVRNTVPCRRQSNHTESIFSHPEAYTKLCCKGFC
IDILKKLSRNIKFSYDLYLVTNGKHGKLVRGTWNGMIGEVLYRRADMAIGSLTINEERSE
IIDFSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYFS
PVGYNRSLVSAKSPGGPRFTIGKSVWLLWGIVFNNSVPVENPKGTTSKIMVLVWAFFAVI
FLASYTANLAAFMIQEQYIDTVSGLSDKKTFCGDRTERSRRGSTQFQKPHEHYPPFRFGT
VPNGSTERNIRSNYIDMHTHMVKYNQKGVEEALESLKTGKLDAFIYDAAVLNYMAGKDEG
CKLVTIGSGKVFATTGYGIALPKGSRWKRPIDLALLQFLGDGDTERLETVWLSGICQNEK
NEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLLYWKLRHSLHKSQKLDFLLSISRG
IYSCFNGVEDPGRSSGLAKPDLTSNYAQANMLKMLRTAKDLVSTANVETSLDNATKTIEH
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggcattttccccttggcctcccctcttcctcctcctcctcctcttggcctcctctccg
ctgccgctgcctgcccggccgctcctcctccacccgtccatcaacgtggcggtggtgttc
agcggctccagctaccagaccgaggtgcgaggtcgcctcagcggggaaaactttgtggac
ctgccggtggtggtcagcccggtgaccgtgctggtcaacgacaccaatccccgcgacctt
ctgacccacctgtgcgacaccatggcgacagagaaactgcacggcgtggtgtttgaggat
gatgtcggctcgggtgccggcgctcaggtggcagaagttgcgcagatcctggacttcctc
tccactcagacggccctgcccatcgtgggaatcagcggcggctccgccatcgtcatccct
tacaaggtacagtcgaatttaccagccagcagcgcctgggaggctgaggggtcctccttc
ctgcagatgggagcatctctggagcagcaagttctctgcatgttcaagatgatggaggag
tatgactggggggagtttgcagtcatcactagcttgctgcctggctacgacacctttgtg
gatatagttgagacctacacagatacctcatacttcttgtggaatgtacaggacgtcctg
tctctcgaaatgtcagtgggggccagcgaagccaagaccaagcgtctgctgcagcagttg
gactctcaggtcctgctggcctactgttcctacgacgaggcgcagtttttgttccgccag
gcggctgaggtgggcctagttggcccaggctacatctggatcatccctagcctagctgta
ggtaaccccaacagccccccgcccgacagcttccccgttggcgttattggggtcatcacc
gatcagtggaggaagagcttacgccagcgggtgagggagggcgtcgccatcgtggccaaa
ggggccgagagctttaagaagcagcacgggtttgtccccgagggacacggcgactgcacc
aaaccagccaaacactcctcagacaacaacactctgttcaggcacatgctaaatgtgacc
tgggagaggaaagacttgtcgttcaacaaccaagggttcctgtccaacccctccatggtc
atcatcgccctggaccgagagagaatctgggacaaggtgggcacgtacgctcgagggatc
cttcaggtgcgctaccctgtctggccccgctacggcagcttcctggacaaggtgtcggat
gatcgtcacctgactgtggccacgctggaggaacatcccttcgtcatggtggagaacgtg
gacccgggaaccggcacgtgtgtccgcaacacggtgccctgcaggcggcagtccaaccac
acagagagcatcttcagccaccctgaggcctacaccaaactgtgctgtaagggcttctgc
attgacatcctgaagaagctgtcccgcaacatcaagttctcctacgacctttacctggtc
accaacggaaagcacggcaagctggttcgtggcacttggaatggcatgataggcgaggtt
ctctatagacgggctgacatggccatcggttctctcaccatcaacgaggagcgttcagaa
atcatcgatttctctgtgccattcgtggagacaggcatcagcgttatggtcgcccggagc
aacggcacagtgtctccatcagccttccttgagccctacagcccggcggtctgggtcatg
atgtttgtcatgtgcctgacagtggtggcggtcaccgtttttgtgttcgaatacttcagt
ccggtcggctacaaccgcagtctggtcagcgccaaatctcccggcggtccgagattcacc
atcgggaagtcggtgtggctgctgtggggcatcgtcttcaacaactcggtccccgtggaa
aaccccaagggaacaaccagcaagatcatggtcctggtctgggccttcttcgctgtcatc
ttcctggcgtcctacaccgccaacctggccgccttcatgatccaggaacagtacatcgac
acggtgtcgggactctccgataagaagacgttctgtggagacaggacggagcgctccaga
aggggttccactcagttccagaaaccacacgagcattatcctccattccgcttcgggacc
gtccccaacgggagcacggagaggaacatccgcagcaactacatcgacatgcacacacac
atggtgaagtacaaccagaagggggtggaagaagctctggaaagcctgaaaaccgggaag
ctggacgccttcatctacgacgctgctgttttgaattacatggctgggaaggatgaggga
tgcaagctcgttaccatcggcagcgggaaggtgtttgcaaccacgggatacggcatcgcg
ctgccgaagggttcccgctggaaacggcctattgacctggctttgctgcagtttcttgga
gacggtgacactgagcgcctggagacggtgtggttgtcgggcatctgccagaatgagaaa
aacgaagtgatgagcagcaagctggacatcgacaacatggcgggtgtcttctacatgctg
ctggtggccatgggcctcagcctgctggtctttgcctgggagcacctgctgtactggaag
ctacgacactcgcttcacaagtcccaaaaactggacttcctgttgtccatcagcaggggt
atttacagctgcttcaatggagtcgaggaccccggccgttcatctggtttagccaaacct
gacctgacctccaactacgctcaagcaaacatgctgaaaatgctccgcactgccaaggac
ctggtgtccacggctaatgtggaaacttctctggacaacgccaccaagaccatagagcac
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