Tetraodon nigroviridis (spotted green pufferfish): GSTEN00027102G001
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Entry
GSTEN00027102G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GSTEN00027102G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tng03019
]
GSTEN00027102G001
Messenger RNA biogenesis [BR:
tng03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
GSTEN00027102G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
ADSL_C
Motif
Other DBs
NCBI-ProteinID:
CAG06650
UniProt:
Q4RY82
LinkDB
All DBs
Position
3
AA seq
297 aa
AA seq
DB search
MLATGAAVTTALAQVDREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSCGT
IAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPF
LHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVA
TFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDN
SRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEGQVTDPRGIPLPPQ
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgctggctacaggagcggctgtgaccacggcactggcccaggtggatagagaaaagatc
taccagtggatcaacgagctctccagtccggagaccagggagaatgcccttctggagctc
agcaaaaagagggagtccgtgcccgacctggctcccatgctctggcactcctgcggcact
atagcagcgctgctgcaggaaattgttaatatctacccatccatcaacccccccacactg
acagcacaccagtccaacagagtttgtaatgcccttgctctcctccagtgtgtggcctca
catccagagacgaggtcggctttcttggctgcacacattccgctcttcctctatccgttc
ttacatacagttagcaaaacaaggccgttcgagtacctgcggctcaccagcttaggagtc
attggggctctggtgaaaacagacgagcaggaagtaattaacttccttttgacaacagag
atcatccccctgtgccttcgcatcatggagtccggcagcgagctctccaaaacggttgcg
accttcatcctccagaagattctcctggacgacacgggtctggcgtacatctgtcagact
tatgagcgcttttcccacgttgccatgattctgggcaaaatggtcctgcagctctccaaa
gagccgtcagctcgtctgctgaagcacgtagtccgctgctacttgcgcctgtctgacaac
tccagagccagagaagcgctgcggcagtgcctcccggaccagctcaaggacaccactttt
gcccaagtcctgaaggacgacaccaccaccaagcgttggctggcccagctggtgaagaac
ctgcaggagggacaggtcacagatcccagaggcattcctcttcctccgcag
DBGET
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