Tetraodon nigroviridis (spotted green pufferfish): GSTEN00027139G001
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Entry
GSTEN00027139G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tng03019
]
GSTEN00027139G001
Messenger RNA biogenesis [BR:
tng03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
GSTEN00027139G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
Motif
Other DBs
NCBI-ProteinID:
CAG06675
UniProt:
Q4RY57
LinkDB
All DBs
Position
3
AA seq
656 aa
AA seq
DB search
GNKEVFSCQGIQLAVDWFLERGHQNITVFVPAWRKEQSRPDAPITDQEILRRLEKEKILV
FTPSRRVQGRRVVCYDDRFIVKLAYESDGIIVSNDNYRDLANEKPEWKKFIDERLLMYSF
VNDKFMPPDDPLGRHGPAWTTSCGDDPSCLSRRNSRAPTERSAPTATSVSTTTRREGAAP
ARRGRRAACQRQDLYRGEEPGRRRLACEGKKGAPKRQSDPSIRALSYSDAEEKLLAKGRA
EVQKSACGSGGGSSVASPAPDGGPPPSLGFPQDQQSRAGTPHGLPASSHDLYPHCESPDL
NYYSLTRAYSGLGLATRRSPDCRFPNDGDLRLGSMGSTGSECGSESSVSCSSSCDSYSER
PCPGCPSDSLLEDGVHFAPPHSRAYAPPPRSKPGALQPSSRRLPRRPARTLVSPRTSRVP
PRAELRPRAASHRSAPEAPSLPATAPLPPAAVGAFQLPRRLPLPPSVRAPPARLPARALP
GTHASRQRVRLASVRTPVHAVHGASPPPDEAPAQLGRLLQTPSVPGIPLRAVGLPEPARR
PPAVLARGGLGPGRLRPAPPAPRRSPPVPGTLRASSPLRSPLQHFPPDVPTPPPRAPPRP
ASALPAAAPGIAHAHRYGDAREKVYVNLCNIFPAELVGRVMARSPHVTDPQQLAAA
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
ggcaacaaggaggtgttttcctgccaagggatccagctggctgtagactggttcctagaa
cgtggccaccagaacatcaccgtgtttgtacctgcgtggaggaaggagcagtcccgcccc
gacgccccgataacagatcaggagatactgcgccgcctggagaaggagaagatcctggtg
ttcaccccatcacggcgtgtccaaggccgccgcgtcgtctgctacgacgaccgcttcatc
gtgaagctggcgtacgagtcggacggcattatcgtctccaacgataactaccgagacctg
gccaacgagaaaccggagtggaagaagttcatcgatgagcggctgctcatgtattccttc
gtcaacgataaattcatgcctccggacgatccactcggccgtcacggcccagcttggaca
acttcctgcggagacgacccgtcatgcctgagcagaagaaacagccgtgcccctacggaa
agaagtgcacctacggccacaagtgtaagtactaccacccggagagagggcgcagcccca
gcgcgccgtggcagacgagctgcgtgccagcgccaagacctgtaccgcggcgaagaacca
gggagacgccggcttgcctgtgaggggaaaaaaggggccccgaaaagacagtcggacccc
agcatccgcgccctgtcctacagcgacgcagaggagaagctgctggccaagggaagggcg
gaagtccagaaaagcgcgtgtggcagcggcggagggagttcggtggcgtctcccgcccca
gatgggggtcccccacccagtctgggcttcccacaggaccagcagtccagggcggggacg
cctcatgggctgccggcctccagccatgacctctacccccactgcgagtccccggacctg
aactactattcgctgacccgggcctactccggcctgggcctcgccaccaggcggagcccg
gactgccgcttccccaacgacggcgacctgcgcttgggctccatgggctccacgggttcc
gagtgcgggagcgaaagcagcgtgagctgcagcagcagctgtgactcgtacagcgagagg
ccgtgtcccggatgcccctcggactccttgttggaggatggcgtccattttgcccccccc
cacagccgggcgtacgcgccgccgccgcgcagcaagccaggagctctgcagccttcatcc
cgccgactaccccggcgtccagcacggacactcgtctcaccccggacttcacgggtacca
cctcgggcagagctgcgcccacgagccgcctcccaccgaagcgccccagaagcgccctct
ttacccgctaccgccccacttccaccagccgctgtcggcgcgttccagctgccccggcga
ctaccactcccaccctcagtccgcgccccacccgcccggctccccgctcgggcgctgcct
ggcacccacgcgagccggcagcgtgtccgactcgcatctgtacgaacaccggtccacgcg
gtccacggcgcatcaccaccaccggacgaagcccccgcccagctgggacgcctactacag
acaccctccgttcccggcatcccgctacgagccgtcggcctaccagagcctgccagacgc
ccaccagccgtcctggcacgggggggcctgggcccaggacggctacggccagcaccaccc
gccccacgcaggtctccacccgtccccggcacactacgggcctccagcccactccgctca
cccctccagcacttcccaccagacgtacccacaccacctcctcgggcccccccacgcccc
gcctctgccctacctgcagcagcacccggaatcgcccacgcgcaccgctacggcgacgcc
agggagaaggtctacgtcaacctgtgcaacatcttccccgccgagctggtgggccgggtg
atggccaggagcccccacgtcacggacccccagcagctggcggccgca
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