Tetraodon nigroviridis (spotted green pufferfish): GSTEN00027297G001
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Entry
GSTEN00027297G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K10891
fanconi anemia group D2 protein
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
GSTEN00027297G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tng03400
]
GSTEN00027297G001
DNA repair and recombination proteins [BR:
tng03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
GSTEN00027297G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FancD2
Ferritin
Motif
Other DBs
NCBI-ProteinID:
CAG06801
UniProt:
Q4RXT1
LinkDB
All DBs
Position
11
AA seq
1445 aa
AA seq
DB search
AVDQVVFQKRLQQRLLKSPRYPEIVQEFTTGLESHIEDLEQFRNCLLPCAPPSSDAAVGS
FHESVLRMLLGIEMLQTSVINTLLEKVPEFMLDSTADGGLSVPRVIINQLKWLDRVVDSK
ELAKKLMELVSVAPVEVQRDIITSLPEILDDSQHNDVAKELSTLLRENTQLTVPILDALS
SLNLSASLLAEVREGVLVTLPAVKLEDLPVVVKFILHSVSASDAYEVVCNLRKKLELEQC
VLPPVLLASQSRIRRGGSPTSDPARSAGSSQDNITLILDAIKSSVRFHKTISEAWLKAIE
SVTEVEDHKVIDLLVLYILHCTNANQSRRGAERVLKAKVRTGMIQEALLQRTFRDYAQVM
RVYFPSILALAQSVLRSPDPCVVSFGGNMYLHSFAAFDSYCQQVVFWFFSRFSDCFLIQI
EEYSTTQNAVLYLTGGGGLPGHPCVLWCGWGGGHISGAPLWSGKRKTHRNGSACCFRQGN
FGLHGQPDTSADPQTLPPPQQTGLRSAAAGRPHPGSALQRQSLLHLGHQVTDLPPSTPQD
DMHIVIRKQLSSTVSKYKRIGIIGAVRMVGSMGALRPKEDAQKGTLPPEMLRQVSALLEL
VKSSSESSPEAAALYYDELANLIVSTVLDPQVQETISQSVLHDFQDDFVVDLGPEITDTF
PFPARVMYSLEEQESQDHIAINLLPLLAKETQHRGEQPSRTEKTHRRVSPLCLSPFFRLL
RLCEEKQHNGDLDEIDGLVGCPLILTDMDVIEKIDSLSKTERDFICTLLFHTLNWFREVV
NSFCQQEDIDVKMKVVTRLQNITYLQTLLEKALSGDPFGTRLSRSPSYTSGFKHGTPGFA
PPVANFDGDSVDVSLAAAPVNKGKKEGVGKKRKAPGQNSSGSSSQLEDTTIGDKTQQEQP
EKEKEKENRHGTSLLSHRASFRELDVEVLRMLQYGLLSRSLLDSEQQTNVGLYVEVCLGP
AELVFLLEDMLRKLEFRLTAGPAKKAPFLKGRSDKSVGFSHLQQRSVKDVVSFTVKLLPT
LCSHLENCHNYFQTFSKNVVGKTLRRSKQSQTFLFHSVIGSQTLLSENGGVVDGPTTDPQ
EHQLMSSGYQLLLQILNTTFSWSGFSQPGHRSLMKMALGELAGRLKEGSAELTLDQLVKH
SVEYLLNFRSTVPSLSTAVCLCQLLSTLSEKGGTPAAYREQMGSLAKHFLSQDWVAANGE
KERGSKFNEALYSLLSIYLAHVNDVLKAVEEIAGEGIPQHLSASKDESSSSWPTLNKQTF
LVFYKVLMAELEKTARKIPPWNSSDGIEAQTEKLLTWNLAVRDFHILVNLVKVFDSRPVL
NVCLKYGRLFLESFLKLGMPILDNSFKRHKEDIQSLLKTFQLSTRQLHHMCGHSKIHQDT
SLTNHVPALKKSLELFVYRVKAMLTLNNCQEAFWIGNLKNRNLKVQSSSSVQQSNLLTTF
SSKNE
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
gctgttgatcaagtggtttttcaaaaaaggctacaacagcgattactaaagagtcctagg
tatcctgagattgtacaagagttcacaaccggactggagtcccatattgaggaccttgaa
cagttcagaaactgcctccttccatgtgcccctccgtcatctgacgcagcagtgggctct
ttccatgaaagtgtgttacgcatgctcctaggcattgagatgctacagacttccgtcatc
aacactttacttgaaaaagtccctgagtttatgctggacagcactgcggacggagggctc
agcgtgccgcgcgtcatcatcaaccagctcaaatggctggaccgagtcgtggacagcaag
gaactggccaagaagctcatggaactggtgtcggtagcgccggtggaggtccagcgtgac
attatcaccagtctgccggagatactggacgactcccagcacaacgacgtagccaaagag
ctcagcactctactccgggagaacacccagctgaccgttcccatcctggacgccctctcc
agtctgaacctcagtgcctctctgttggcagaggttcgtgaaggtgttttggtcactttg
cctgcagtcaaactggaagatctgcctgtcgtggtcaaattcatccttcactccgtttct
gcctctgatgcgtacgaggtggtgtgtaatctgaggaagaagctggagctggagcagtgc
gtgctccctcctgtgctgctggcttcccagagcaggattaggagaggaggctcaccgacg
tcagatcctgcacggtcagctgggagcagccaggacaacatcactttgatattagacgcc
atcaagtcatcggtgcgattccacaaaaccatctctgaggcttggctgaaggcgattgag
tctgtgactgaagtggaagaccataaggtgatagatctgctggtactttacatcctccat
tgcacaaatgccaaccaaagccggcgtggggcggagagggtgctgaaggccaaagtgagg
accggcatgatccaggaggctctgctccagaggaccttcagggattatgcccaggtcatg
cgagtgtatttcccctcaatcctggctctggctcagagcgtgctacgctcacctgacccc
tgcgtggtgtcgttcggcggaaacatgtacctgcactcattcgctgcctttgactcttac
tgccaacaggtagttttttggttttttagtcgttttagtgactgttttttaatccaaatt
gaggagtattcaactactcagaatgctgtattgtatctgacaggaggtggtgggctccct
ggtcacccatgtgtgctgtggtgtgggtggggaggtggacacatctctggagctcctctg
tggtctggtaaaagaaaaacccacagaaatggctcagcatgctgttttcgtcaagggaat
tttggactacatggacaacctgacacttcagcagatccgcagactcttccacctcctcag
cagactggccttcggtccgcagcagcagggcgcccacatccaggttcagccttacagaga
cagtccctccttcatctcggtcaccaggtcactgacctccctccctccaccccccaggat
gacatgcacatcgtgatccgcaagcagctctccagtactgtatccaagtacaaacgcatc
ggcatcatcggcgcggtcaggatggtgggcagcatgggagcactcaggcctaaagaggat
gcacagaaggggacgcttcccccggagatgctccgacaggtgtcagccctgctggagctg
gtgaagtccagcagtgaaagctcccccgaagctgcagctctgtattacgatgaattagcc
aatctgatcgtgagcaccgtcctggacccacaggtccaggagacaatctcccagagcgtc
ttgcacgacttccaggatgattttgtggtggacttggggccggaaataaccgacaccttt
cccttccctgctcgcgtgatgtacagcctggaggagcaggagagccaggaccacatagcc
atcaacctgctgcctctgctggccaaagagacgcagcacagaggagagcagccaagccgg
acggaaaagacccacaggcgagtctctcctctgtgtctgtcccctttttttcgtctcctg
agactctgtgaggagaagcagcacaacggagaccttgacgagatcgacggcttggttggc
tgccctctgatcttaaccgacatggatgtaatcgagaaaatagacagcctgtccaagacg
gagagggactttatctgtactttgttgttccacactctcaactggttcagagaggtcgtc
aattcattctgtcagcaagaagacatcgacgtgaagatgaaggtggtgacccgtctgcag
aacatcacctaccttcagactctgttggagaaggcgttgtcaggtgatccattcggtacc
aggctctcgcggtcccccagttataccagtggttttaaacatgggacacctggttttgct
ccaccagtcgctaattttgacggcgacagcgtggacgtctctttagctgctgcacctgtg
aataagggaaagaaagaaggcgttgggaagaagcgaaaggccccaggtcagaattcatca
ggaagcagctctcagctggaagacaccaccattggagacaaaacccagcaggagcaaccg
gagaaggagaaggagaaggagaaccggcacggtaccagccttctgtcccacagagcttcc
ttcagagagctggacgtggaggtcctgaggatgctgcagtacggtctgctgtcccgctcg
ctgctcgactcggagcagcaaaccaacgtaggactttatgtggaggtctgcctgggccct
gctgagctggtcttcctgcttgaggatatgctccgcaaactggagttccgtctgactgct
ggccctgccaaaaaggccccttttctcaaggggaggagtgataagagtgtaggtttctcg
cacctccagcagagaagcgtgaaggacgttgtttcctttaccgtcaagctgctgcccacc
ctctgctcacacctggaaaactgccacaactattttcagacgttctcaaaaaacgtagtg
ggtaaaacactcaggaggagcaagcagagtcagacgtttctgttccactctgtgattgga
tcccagactctgctgtctgaaaacggcggcgtggtggacggacccactacagatccccag
gagcaccagctgatgtcatctggctaccagctgctcctgcagatcctgaacaccaccttc
agctggtctggattcagtcagccgggacatcgaagtctaatgaagatggctctgggggaa
ttagctggaagactaaaggagggcagcgctgagctgaccctggaccagcttgtgaaacac
agcgttgagtacctgttgaacttccgtagcacagtgccaagtctcagcacagccgtgtgt
ctctgccagcttctgtccaccctgtcggagaaaggcggaactcctgctgcctacagagag
cagatggggtccctagcaaaacatttcctgagtcaagactgggtggcagcaaatggagag
aaggagcgagggagcaaattcaacgaagctctttacagtctccttagcatctacctggca
catgttaacgatgttctaaaggcagtggaggaaattgctggagagggaatcccacaacac
ctcagtgcttccaaagatgagagctcatcctcatggcccactcttaacaagcaaaccttc
cttgtgttttataaagtactgatggcagagctggaaaagactgccaggaagattccccca
tggaacagcagcgacggtattgaggctcagactgaaaagttgctgacatggaacttggct
gtcagagattttcatattctggtcaatctagtcaaggtctttgattccagacctgttctc
aatgtgtgcctgaagtatggccgtctgttcctggagtctttcctgaagttggggatgccg
attctggacaacagttttaaaaggcacaaggaggacattcaaagcctcctgaaaactttc
cagctcagcacccggcagctccatcacatgtgtggacattctaagattcaccaggacacg
agcctgaccaatcacgtgcctgccttgaagaagagcctggagctgtttgtgtacagggtg
aaggccatgctgacgctcaacaactgtcaggaggccttttggatcggaaacctgaagaac
cgcaacctgaaggtacagagcagctcttcagtacaacagtcgaatcttttaacaacattt
tcctcaaagaacgaatga
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integrated database retrieval system
