Tetraodon nigroviridis (spotted green pufferfish): GSTEN00027331G001
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Entry
GSTEN00027331G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K12892
serine/arginine-rich splicing factor 3
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03040
Spliceosome
tng05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GSTEN00027331G001
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
GSTEN00027331G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tng03041
]
GSTEN00027331G001
Spliceosome [BR:
tng03041
]
Common components
Common spliceosomal components
SR proteins
GSTEN00027331G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-ProteinID:
CAG06833
UniProt:
Q4RXP9
LinkDB
All DBs
Position
11
AA seq
222 aa
AA seq
DB search
MHRDCPLDCKVYVGNLGNNGNKTDLERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDATD
AVRELDGRTLCGCRVRVEHSSGEKRSRARGVPPSWSRRPRERDDYRRRSPPARRSLLKTK
NTSRRAGGPRAAVGAGRSPGTGGGIGPFPGTGTTNHRGPFHHHGAAPGLLREDRASVGSY
RLECEPLHLCCCFIRWTSFWMSLLMHHCVLPPHLKSSSYQWV
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgggactgtcctcttgactgcaaagtctacgttggaaatttaggcaataatggc
aacaagacagacctggagagggcttttggttactacgggccccttcgcagtgtttgggtg
gccaggaaccctccaggtttcgctttcgtagagtttgaagaccccagagatgcgactgat
gcagttcgggaactcgatggacggacattgtgtggatgccgtgtgcgagtagagcattct
agtggagagaagagaagccgtgcccgtggcgttcctccatcatggagccgacgcccccga
gagcgagacgactacaggcgtcgtagccctcctgctagacgaagcttgttgaaaaccaaa
aacactagtcgccgcgcaggaggaccgcgagccgcagtcggagcaggtcgctctccaggg
acaggaggagggataggtccctttcccgggacaggaaccacaaaccatcgaggtcccttt
caccatcacggagccgctccaggtctactgagagaagatagagcgtctgttgggagttac
aggctcgagtgcgagccattgcatctttgttgctgttttatacgatggacttcattttgg
atgtctcttcttatgcatcactgtgttcttccacctcatctgaagtcatcgtcctatcag
tgggtgtag
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integrated database retrieval system
