KEGG   Tetraodon nigroviridis (spotted green pufferfish): GSTEN00027479G001
Entry
GSTEN00027479G001 CDS       T04346                                 
Name
(GenBank) unnamed protein product
  KO
K14793  ribosomal RNA-processing protein 9
Organism
tng  Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:tng00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tng03009]
    GSTEN00027479G001
Ribosome biogenesis [BR:tng03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    GSTEN00027479G001
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_CDC20-Fz EIF3I WD40_Gbeta WDR55 Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_WDR41 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_IP5PC_F Beta-prop_SPT8 WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_VPS8 Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_DCAF12 Beta-prop_WDR75_2nd PEP5_VPS11_N Beta-prop_Vps41 Beta-prop_ACSF4 Beta-prop_WDR19_1st Beta-prop_RIG_1st WDR54 WD40_like
Other DBs
NCBI-ProteinID: CAG06962
UniProt: Q4RXC0
LinkDB
Position
11
AA seq 434 aa
KPNSKYNEEISSESETESNVEPKKRHPVEEQEYEETPQEKKLRLAKLYIDQLKEEEEQKA
DDEAFETHLVAERLQEQVLEQKGKLQRPIAKDLLPPDASDIRLLRGHKLPVTCLVITSDD
KCIFSAAKDCSIIKWDVESGKKLHTIPGGRKGTEDRHVGHTAHILCMAVSSDAKYLATGD
VNKLIMIWEAETCKHLYKFTGHKGPVSGLSFRRGTHDLYSASHDRSIKVWNVDENAYVET
LFGHQDAITGLDCLSRERCVTTGGRDRSVRVWKIAEESQLVFHGHEGSIDCVQLINEEHM
ITGADDGSVCLWSVNRKKPLSTVKQAHGCHGDAGLEQPHWVASVAALQNSDTVASGSHNS
LVQLWKCAQNFRGLDPLFSIPVPGFVNSLKFSSSGQFLVAGVGQEHRLGRWWRIKEAKNG
IYIIPLKRRAPNPE
NT seq 1302 nt   +upstreamnt  +downstreamnt
aaacccaactccaaatacaacgaagagatttccagcgagtctgagacggagagtaatgta
gagcccaaaaaaaggcatcccgttgaggagcaagagtatgaagaaactcctcaggagaag
aaacttagactagccaaactgtacatagaccagttaaaggaggaagaggagcagaaagca
gatgatgaggcatttgaaactcatttagttgccgaaagacttcaagaacaagtgcttgaa
caaaaaggaaaactgcagagacccattgccaaggatcttttgccaccagatgcttcggac
atcagactgttaaggggacacaaacttccagtcacctgtctggtcatcacctccgacgac
aagtgcatcttctctgctgctaaagattgctccattattaagtgggatgttgagagtggg
aagaagctgcacacgataccaggtggaaggaaaggaacagaggaccgacatgttgggcac
accgcccacatcctgtgtatggcagtttcatcggacgctaaatatttggccacaggtgac
gtgaacaagctgataatgatctgggaagcagaaacatgcaaacacctctataaattcaca
ggacacaaaggccccgtgtcgggtctttcattcaggcgaggaacccacgacctttacagc
gcctctcatgaccgttcgattaaagtgtggaacgtagacgagaacgcctatgtggaaact
ctgtttggtcatcaggacgccattacgggactggactgcttgagccgcgagcgctgcgtg
accacgggaggaagggatcgctcggtgagggtgtggaagatagccgaggaatctcagctg
gtgtttcacggccacgagggctccattgattgtgtgcagcttataaacgaggagcacatg
ataacgggagcagacgacggctccgtgtgtctttggagcgtcaacaggaagaaaccactc
agcaccgtgaagcaggctcacggttgccatggtgacgcggggctggagcagcctcattgg
gtggcctcggtcgcagcgcttcagaactccgacacggtcgcctcaggttcacacaactca
ctggtgcagttgtggaaatgtgcacagaatttccgtggtctggatcctctgttcagtata
ccagtgcccgggtttgttaacagtctaaagttttctagctcaggtcagtttttggtggct
ggagttggacaggaacacaggttgggtcgatggtggagaataaaggaagccaaaaatgga
atttacatcattcctcttaaaaggagagctccaaatccagag

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