Tetraodon nigroviridis (spotted green pufferfish): GSTEN00027615G001
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Entry
GSTEN00027615G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K06583
integrin alpha 7
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04510
Focal adhesion
tng04512
ECM-receptor interaction
tng04810
Regulation of actin cytoskeleton
tng04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
GSTEN00027615G001
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
GSTEN00027615G001
09142 Cell motility
04820 Cytoskeleton in muscle cells
GSTEN00027615G001
04810 Regulation of actin cytoskeleton
GSTEN00027615G001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tng04147
]
GSTEN00027615G001
04515 Cell adhesion molecules [BR:
tng04515
]
GSTEN00027615G001
Exosome [BR:
tng04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GSTEN00027615G001
Cell adhesion molecules [BR:
tng04515
]
Integrins
Integrin alpha subunits
GSTEN00027615G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_1
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-ProteinID:
CAG07074
UniProt:
Q4RX08
LinkDB
All DBs
Position
11
AA seq
1284 aa
AA seq
DB search
ILVGAPQAAGQGPLRGSRPGALFRCPITPEEYDCERVDIDGEVSLNRESKHNQWLGVTVK
SQGIGGKVVTCAHLYELRQRVSQPSETRDPIGRCYVLSEDLTERDDLDGGEWKFCEGRPQ
GHEQFGFCQQGLSVSFTPDNNFILFGAPGTYNWKGEMRVQLLNQTLLDLGLYDDGPYEVA
DQKQLNAQLIPVPYHSYLGLLFMASPIEDALLYKTLEPSSRPTPFEDVAHNSYLGFSVDS
AMDVMSLGELTFVAGAPRANHTGAVVLLRKDNVYRLVPQHIFWGEELASSFGYSVATTDL
NKDGWTDLIIGAPNFFDRKAEIGGAVYVYLNPFGHWDDQARPIRLNGTYDSMFGMTVSSV
GDLDQDGYGDIAVGAPFDGDGKVFIYRGSDAGIETKPAQVLDGRDFDVRRFGYSISGGLD
IDANHYPDVAVGSLNDSVVLFRSRPVIHVIREISIDPQQIDLEQDNCKGRAGVCVEVKAC
FAFMAHPEHYSPHITLLVHFEADTERRKLGLPHRVNFLGRSSLDPEYTQIEEVELHNQHH
HVCTSAAFQLHENIRDKLRPISLEITHTIKPVPPRRHSASKRLEKLPPVLSVSPSNTLYS
EVNFLREGCGVDKICQSNLKLSYQFGTRPLTSDLFTPLPKDEDDVQVFSVSDQRLVVLEI
TVTNKPSNPLLPEEDGDDAHAAQLFISLPDTVSYAGSRIPEQMRCQANKNGSFVECDLGN
PMKRNTKLKFSINLSTSNITIETTELTADLSLTTISEQPDLVPVTALAKVVIELPLSVSG
IAEPRQLFFSGSVRGESAMRSLEDIGSPVDFEFVVTNPGQELQTFGSAFLNIMWPYELFN
GKWLLYPASLKFNDAADTRCTSSGALNPLRLHSSSPAGITSVNHKHPGRARRSHPEDVGH
VATKDSVGRTTPAVAASERRKSLKLVRGRNRKGKKGKYSSLVAHWSFSPPGLSSRVRPLR
PVSVSSPQLLWTGCPQDPRQAVEHKLHRGVSSRQRSGADGQSQHHRQVQHQTSGSEGCCC
TGFWTHTCAHTQVLLGIINQWTFCLHQVPVMIYPEPGLADQFWIPWWIILIAVLAGILLL
TLLVCLLWKVTHTIFYTRALKTQYFVFLIKKKPKSASFSLLLHLTSKTIPLYVCQVISFF
FLPVFFSLNDFILTYPFPLFLPLLLLSFAFFNTLSLFISHSFPNLFSPLLRSGHLLSSVA
SSSAPSRAATMRRSTTAPTWGSSPRSVVSSSGPTTKTNCPSTTRLRFLAGIGRSSRQRSR
AKSIKKNGPHTGATGPPNFFCSTD
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atccttgttggggcgccacaggcagcagggcagggcccgttgaggggcagccgacctgga
gccttgttcagatgtccgatcacacctgaagagtacgattgcgagagagtggacatagat
ggagaagtaagtctgaaccgagagagcaaacacaaccagtggctgggagttactgtcaag
agtcaggggatcgggggcaaagtggtgacctgcgcgcacctctatgagctcaggcaacgt
gtaagtcaaccgtcagagacccgcgaccccatcgggcgctgctacgtcctgagtgaagac
ctgacggagcgggacgacctggatggaggagaatggaaattctgcgagggccgcccgcag
ggacacgagcagtttgggttctgtcagcagggcctttcagtcagtttcacgcccgataac
aacttcattctgtttggggccccaggaacgtataactggaaaggtgagatgcgcgtccag
ctcctcaaccagactctgctcgacctcggtctctatgacgacggaccatacgaggtggca
gatcagaaacagctaaacgcacagctcatccctgtgccctaccacagttacctggggctc
ttgttcatggctagtccaattgaagatgcactgctctacaaaactctggagccctccagt
cgacccacaccatttgaggatgtagctcataatagctacttaggattttcagtggactca
gccatggatgtcatgagcctcggggagctgacctttgtggcgggggcgcctcgggctaat
cacacaggagcggtggtgctgctgaggaaagacaacgtgtaccgactggtaccacagcac
attttctggggcgaggagctggcatcgtccttcgggtattcggtggccacaacggacctg
aacaaggatggttggacggatctcattattggagctccaaatttctttgaccgtaaggcg
gagattggcggagctgtgtacgtctacctgaacccctttggccactgggatgatcaggcc
cggcccatccgcctgaacgggacgtacgactcaatgttcgggatgacagtcagtagcgtc
ggagacctcgaccaggatggatacggagatatcgctgtgggcgcaccttttgatggagat
ggcaaagttttcatctacagagggtcagacgctggaattgaaactaaacctgctcaggtg
ctggatggtcgcgattttgacgtgagacgttttgggtactccatctcaggtggtttggat
atcgatgctaaccattacccagatgtagccgtgggctccctcaatgactctgtggttctt
ttcaggtcgcgtcctgtcatccacgtgatcagagaaatatccatcgatcctcagcaaatt
gatctggagcaggacaactgcaagggcagggctggagtctgcgtggaggtcaaggcttgc
tttgcctttatggcccacccagagcactactcaccacacataaccctgctggtacacttt
gaagctgacacagagcgcagaaagctgggcctccctcatcgcgtcaacttcctgggccgc
agttccttggatccagagtacactcagatagaagaggtggagctgcacaatcagcaccac
cacgtgtgcaccagcgctgcattccagctccacgagaacattcgtgacaaactgcggccc
atctcactggagataacccacaccattaaaccggttccaccacgcagacactctgcttcc
aagagactggaaaagctgccgcctgtactcagtgtttctccctccaacacactttactca
gaggtgaacttcctccgagagggatgcggagtcgacaaaatctgccagagcaacttgaag
ctgagctaccagtttggaacacgacctttgacctctgacctcttcacgcctctgccaaag
gatgaggacgatgtgcaggtgttctctgtgtcagaccagcgtttggtggtgctggagatc
accgtcaccaacaagccatccaatcctctgcttcccgaggaggacggagatgatgctcat
gccgctcagttgttcatctctcttcctgacacagtgtcatacgcaggctccaggatccca
gagcagatgaggtgccaagcaaacaagaatggctcctttgttgaatgtgacttggggaac
ccaatgaaaaggaacacaaagctgaaattctcaatcaacttgagcacgtctaacatcacc
atcgaaaccactgagttgacagcagacctctcactgacaacgatcagtgagcagcctgac
ctggttccagtcacagctctggctaaagttgtgatagagctccccctttcggtcagcgga
attgctgagcctcgtcagctgttcttcagtgggtccgtaagaggtgagagcgccatgaga
agcctggaggacatcggcagtcctgttgattttgagtttgtggttaccaaccctggtcag
gaactgcagaccttcggctcggccttccttaacatcatgtggccctatgagctgttcaat
gggaaatggctcctctatccggccagcctgaagttcaatgacgctgcagacacgcgctgc
acctcatccggggccctgaatcctctgagactgcacagctcctcccctgcaggaatcact
tctgtcaatcacaaacaccctggacgagctcggcgctcccaccccgaagacgtaggtcat
gtggccacaaaggacagcgtgggaaggaccactccggccgtggcagcttcagagagacgc
aagtccctgaaattggtaagaggtagaaacaggaaggggaaaaaagggaaatacagtagt
cttgttgctcattggtccttctccccaccaggactgtcttctagggtccgcccgctgcga
cctgtttcagtgtcctctccacagcttctctggacaggctgtcctcaagatccacgccag
gctgtggaacacaagcttcatagaggagtgtccagccgtcagcgctctggagctgatggt
cagagccaacatcaccgtcaagtccagcatcaaacatctggttctgaaggatgctgctgc
acaggtttttggacacacacatgcgcacacacacaggtgctactgggtataattaaccaa
tggaccttttgtctccaccaggttcctgtaatgatctaccctgagccgggcctggccgat
cagttctggatcccctggtggatcatcctcattgctgtcctggcaggcatcctgctgctg
accctactggtctgcctgctgtggaaggtaacccacacaatcttttacacacgtgctctc
aaaactcaatattttgtctttctgattaaaaaaaaacccaaatcagctagttttagcctg
ttacttcacttgacatccaaaaccattccactctatgtttgtcaagttatttctttcttc
tttctcccagtgtttttttccttaaatgattttattctcacatatccgtttcctcttttc
ttacctttgttgttgctctcatttgcatttttcaatactctctctctttttatttcccac
tctttccccaatctattctctcccctcctccgctcgggtcatctcttgtccagtgtggct
tcttcaagcgcaccgagccgcgccgccactatgagacggagtactaccgcgcccacttgg
gggtccagccctcggagtgtggtttcttccagcgggcccactacaaagacaaattgcccc
agtaccacgcggttaagattcctcgcggggatcggccgcagttccagacagagaagtcgg
gcaaaatccataaaaaagaatgggccacacactggagcgacgggacctcctaacttcttc
tgtagcactgactga
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