Tetraodon nigroviridis (spotted green pufferfish): GSTEN00027714G001
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Entry
GSTEN00027714G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K11804
DDB1- and CUL4-associated factor 8
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tng04121
]
GSTEN00027714G001
Ubiquitin system [BR:
tng04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
GSTEN00027714G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
ANAPC4_WD40
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_SPT8
Motif
Other DBs
NCBI-ProteinID:
CAG07154
UniProt:
Q4RWS8
LinkDB
All DBs
Position
15
AA seq
504 aa
AA seq
DB search
HSTSSDEDDDDDDDDDDRKDEDDDDEDEDEDDNEAMEAWLGAELQDLRGPVWRAVPSLRS
REIGRDAHQFVRRVCGARGLVQRLELQGRLERHTGCVNTLHFNPSGTRLASGSDDLRVVI
WDWAVRHAVLEFDSGHKSNVFQVGAKQPCCRGNAATHRNALRSKVCFALIARIQAKFLPH
SGDSTLAMCARDGQIRVAELSATQCCKNTKRVAQHKGAAHKLALEPDSQCSFLSAGEDAV
VFGIDLRLDRPANKLVVVKEGDKKVGLYTIYVNPAKTHHFAVGGRDQYVRIYDQRKINEN
DNNGVLKKFCPSHLVSIESKTNITCLVYSHDGTELLASYNDEDIYLFDSNHSDGADYLRR
YKGHRNNATGVCSASSFPHFWGIARGLTPPPCPPPLSSLRLSVKGVNFYGPCSEFVVSGS
DCGHIYLWDKYSARIVQFMEGDKGGVVNCLEPHPHLPGMATSGLDYDIKLWAPTAENPTG
LKGLKEVFLSFLGTLHQSDASRLG
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
cactccacgagctcggatgaggacgacgatgacgacgacgacgacgacgaccgtaaagat
gaggacgacgacgacgaggacgaggacgaagacgacaacgaggccatggaggcctggctg
ggggcggaactccaggacctgcggggcccggtgtggcgcgccgtgccgtcgctgcgctcc
agagagatcggcagagacgcgcaccagtttgtgaggcgcgtttgcggcgcccggggcctc
gtccagagactggagctgcagggccgcctggagaggcacaccggctgcgtcaacacgttg
cacttcaacccctcgggcacgcggctggcctccggcagcgacgacctgcgcgtggtcatc
tgggactgggctgttcgtcacgccgtgctggaatttgacagcggccacaagagcaacgtc
tttcaggtaggagcaaaacaaccgtgttgtcggggcaacgccgcgacccatcgcaacgca
ctgaggagtaaagtatgttttgcgttgattgcgcgcatacaggcaaagttcctgcctcac
agcggagactccaccttggccatgtgcgctcgcgacggccagatcagagtggccgagctc
tcggccactcagtgctgcaagaacaccaagcgggtagcgcagcacaaaggcgctgcgcac
aaactggcccttgagcccgactcccagtgttccttcctctctgccggagaagacgccgtg
gtctttggcatcgacctgcgtttagaccggcccgccaataaactggtggttgtgaaggaa
ggtgacaagaaggtggggctgtacaccatctacgtcaacccggccaagacgcaccacttc
gcagtgggcggaagagatcagtacgtgagaatctacgatcagaggaaaatcaatgaaaac
gacaacaacggtgtcctgaaaaagttctgcccctcgcatctggtatcgatcgagtccaaa
accaacatcacctgtctggtttatagccacgacggaacagagctgttggccagctacaac
gacgaggacatctacctgtttgactccaaccacagcgacggggccgactacctcaggaga
tacaagggacatcgcaacaacgccacaggtgtttgctccgccagctcattccctcatttt
tggggtattgcccgcggactgacgcccccaccctgccccccccctctgtcctccctccgt
ctctcagtgaagggggtgaacttctacgggccatgcagcgagtttgtggtcagcggcagc
gactgtggacacatctacctgtgggacaaatactccgcccgcatcgtgcagttcatggaa
ggagacaaaggaggagtggtgaactgtttggagccacacccccaccttccaggcatggcc
accagtggactggattacgacatcaaactgtgggcccccaccgccgaaaaccccacagga
ctcaagggcctgaaagaggtgtttctttcatttctgggaacgcttcaccaaagcgatgcg
tctcgattaggatga
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