Tetraodon nigroviridis (spotted green pufferfish): GSTEN00027897G001
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Entry
GSTEN00027897G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K14328
regulator of nonsense transcripts 3
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03013
Nucleocytoplasmic transport
tng03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GSTEN00027897G001
03015 mRNA surveillance pathway
GSTEN00027897G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tng03019
]
GSTEN00027897G001
Messenger RNA biogenesis [BR:
tng03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
GSTEN00027897G001
mRNA cycle factors
P-body specific factors
GSTEN00027897G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
DUF6980
Transformer
Motif
Other DBs
NCBI-ProteinID:
CAG07286
UniProt:
Q4RWE6
LinkDB
All DBs
Position
2
AA seq
276 aa
AA seq
DB search
LFQVVLRRLPPSLTKDQLEEHLSPLPPFDYFEFFPADQSLYPHLFSRAYINFKNPDDILL
FRDRFDGYVFIDSKGQEYAAVVEFAPFQKISKKKLKKKDAKAGSIEEDPEYKRFLENISC
DEEKSLANPEILLGEIEAKTRELIARRTTPLLEYIKNKKIEKQVRLTATRSRGSSTAADR
ERRTTGAKRMRGSDSDTTTTLTSSCGTRRRRDGERVTATTEPRKRGITTAFPTAPTVETN
WPRMTGRIWIAGKSASETRIAQPCSSISQVHAIGSA
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
ttatttcaggtggtgctcagaagactcccaccaagtctaacaaaagaccagctggaggaa
catctgagtccacttcctccgtttgactattttgagttctttccagctgaccaaagtctc
tacccccacttgttctccagagcatatatcaactttaaaaacccagacgatatcctgcta
ttcagggaccggtttgatggttacgtcttcatcgacagcaagggccaggagtatgctgct
gtggtagagtttgcccccttccagaaaatttccaagaagaagcttaaaaaaaaagatgcc
aaagccggaagcattgaagaagacccagaatacaaacggttcctggagaatatctcctgt
gatgaggagaagtcattggccaacccggagattctgctcggagagatagaggccaagacc
agggagctcattgccagaaggacaacgcctcttttggaatacatcaaaaataaaaagatc
gagaaacaagtcaggctgacagcgacaaggagcagagggagcagcacagccgccgaccgc
gagagaaggacaacaggggcaaagaggatgagaggaagcgacagcgacaccactacgact
ttgacaagttcgtgcggcacaaggaggagacgagatggggaaagggttactgccacgacc
gagccaagaaagaggggcatcaccacagcttttcctactgccccgacagtggagacaaac
tggccaaggatgacagggaggatctggatagcaggaaagagcgcctccgaaacaaggatc
gcccagccatgcagctctatcagccaggtgcacgcaataggaagcgcatga
DBGET
integrated database retrieval system
