Tetraodon nigroviridis (spotted green pufferfish): GSTEN00027960G001
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Entry
GSTEN00027960G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K10161
toll-like receptor 9
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04142
Lysosome biogenesis
tng04620
Toll-like receptor signaling pathway
tng05132
Salmonella infection
tng05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
GSTEN00027960G001
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
GSTEN00027960G001
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
GSTEN00027960G001
09171 Infectious disease: bacterial
05132 Salmonella infection
GSTEN00027960G001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tng04054
]
GSTEN00027960G001
04090 CD molecules [BR:
tng04090
]
GSTEN00027960G001
Pattern recognition receptors [BR:
tng04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
GSTEN00027960G001
CD molecules [BR:
tng04090
]
Proteins
GSTEN00027960G001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
TIR
LRR_Zer-1
TIR_2
LRR_6
LRR_5
LRR_12
Motif
Other DBs
NCBI-ProteinID:
CAG07333
LinkDB
All DBs
Position
9
AA seq
1019 aa
AA seq
DB search
PIFLPCDTDVNTTRVDCSDRHITHVPIIRSNTVTSLRLSRTKIFQVGPDNLSHMPNLRVF
IMADNCQPSGMKATLHACKVEINHFAFSRSLQLQVLNLSGNSLTSLPWLPEKLKVLNLQR
NRLFNIVEPLKTPYLKELNLAKNCFHANPCLQSLNISDSVFSELSQLKTLSLAQNNLTSV
PKALPSSLEHLDLSENTITEVLEGTFADFIHLNHLNLEWNCQRCDHAAQPCFPCPKNQPL
QLYSKSFYTNKSSLIFLSLRGNSLRTFPKGLFQPLKKLAYLDISDNFLSDAIQKGSFFAE
LTSLSWISLIYNYEPLKTLPRLSLSPHIGTISGLQHLLLSGNFFHSFSPQSFEVLYKLQK
LTRLELRMNFINTFDLKALKRVPSLTSINLSQNILSVFSDCPISSAEREICHNQSTCNLG
SSNPSLVRKGQNVTFERDFLDQFDRLEMSSPQSSLLWKKFCQKKVTFDLSQNNIISVNRK
VLAGMEHVACLDLSFNYMSQTLRSGMFDGMKYLVFLNLSYNRLDLYYDEAFSELKDTLKL
LDLSNNDYHFKMKGMGHRLTFIKNLVNLEVLSLANNAIAARIDQRLVSDSLKQLYFSGND
LNLMWSSENNQYLNFFQNLTNLTYLDISDNKIRLVSPKVLCNLPTSLQNLSLSNNRLTYF
PWENISALTNLHHLDLSQNFITFLPHIVIQAPASFLLLDLSHNRINYLPQSFFRAMNSLR
RLYLSHNQLKQFDHQLALFKSTSALQMLSLHANPFNCDCSASRFVDFLRNTLVDIPHLTT
EVNCEYPESQRGKAMLSMDQPSCQDMYGSLASVICSFLVVAFTLLPLLKHLYGWDLWYSL
QVFWAECKGYSQLSGRDVKYNYDAFVVFDTSKLDVRDWVYNELLVHLENSAHRRFCLCLE
ERDWVPGLSCIENLHNAVSSSMKTVFVLSNDTLEPMSGVIRQAFFMVQQRLLDEKVDAAV
LVLLDETFPKVKYLQLRKRLCRKSVLSWPKNPKAQPLFWNQVRMALSSDNLSFYDNNMS
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
cccatcttcttgccatgtgacacggacgtgaacaccaccagagtagattgctccgacaga
cacatcacgcacgttcccatcatcaggtccaacaccgttacatcactccgtttgagccgg
acaaagatcttccaagtgggcccagacaatttatcgcacatgccgaacctacgggttttc
atcatggcggataactgtcagccatctggcatgaaagctacgctccatgcctgcaaagtt
gagatcaatcactttgccttcagtcgctcgttgcagcttcaggttctgaatctgtcagga
aacagtctcacttccttaccctggttacctgaaaaactgaaagtactcaatctacagaga
aatcgcctctttaacattgtggaaccattaaaaacgccatatctcaaagagcttaatctc
gccaaaaactgctttcatgcgaacccttgcctccagtccttgaacatcagcgacagtgtt
tttagtgagctctctcaacttaaaacccttagtctggcacagaataatttaacatctgtc
cctaaagcactgcccagctcactggagcatctggacctgagtgagaacacaattacggag
gtcttggaaggaacctttgctgattttatacacctgaaccatctaaacctagaatggaat
tgccagcgttgtgaccatgcagctcagccctgctttccatgtcccaaaaatcagccttta
cagctgtattcaaagtcattctataccaacaaaagctccctcatcttcctaagtctgaga
ggaaactctttaagaacattcccaaagggtctcttccagccccttaaaaaattagcatat
ctggacatttctgacaacttcctctctgacgccatacagaaaggcagcttctttgcagaa
ctgacctccctgtcttggattagtcttatttataactacgagccactgaagacgttaccc
cgactgtccctctccccacatattggcacgatatccggactgcagcatcttcttctgagc
ggcaacttttttcactcgttttctccccagagcttcgaggttctctacaagcttcaaaag
ctaacgaggctggagctgaggatgaacttcatcaacacctttgacttgaaggctctgaaa
cgggtgccctcccttacctccattaacctctcccagaacatacttagtgttttttcagac
tgcccaatttcatctgccgagagagaaatttgccataaccagagcacctgtaacctcggt
tcctccaacccctcccttgtgagaaaaggacaaaatgtaacgtttgaaagggacttcttg
gaccagtttgacagactagaaatgtcctcacctcagtcctcattactgtggaagaaattc
tgccaaaaaaaggtgacatttgatctttctcaaaacaacataatatctgttaacaggaag
gtgctcgcaggcatggaacacgtggcttgtttagacctttccttcaattacatgagccaa
actttgaggagtgggatgtttgatggcatgaagtacttagtgtttcttaatctgtcgtac
aacagactggatttgtattacgacgaagcttttagtgagttgaaagacacgttaaagctt
ctggacctgagtaacaatgactatcattttaaaatgaagggcatgggccaccgtttgaca
ttcatcaagaacctggtgaacctggaagtccttagcttggctaacaacgctatcgcagcg
cggatagatcagaggctggtcagcgactcgttaaagcaactctacttcagcggaaacgat
ctgaacctaatgtggagctctgaaaacaaccagtaccttaatttcttccagaacctgaca
aacctcacctacttggacatatcagacaacaaaattaggctggtttccccaaaagtgctg
tgtaaccttccgacgagcctgcagaacctgagcctcagcaacaatcggctcacctatttc
ccatgggagaacatttcagcgctcaccaacttgcatcacctggacctcagtcagaatttt
attaccttcctgcctcatattgtcatacaggctccggcatccttcttactcttggacctc
agccacaatcgcatcaattacctccctcaaagtttcttccgtgccatgaattctttgcgc
cgtttgtacctcagtcacaatcagctcaaacagtttgaccaccagttggctctctttaaa
agcaccagcgccctccagatgctcagcctgcatgctaaccccttcaactgcgactgcagt
gcttctaggtttgtggactttctgcgcaacactctggtcgacattccccatctgaccact
gaagtaaattgtgaatatccggagtctcagcggggcaaagccatgctctctatggaccag
ccttcctgccaggatatgtatggtagcttagcttctgtaatctgttcttttttggttgtc
gcttttactcttctacccctcctcaagcatctctacggctgggatctttggtattcttta
caagtgttttgggcagaatgtaaaggctactcccagctaagcggccgcgatgtgaagtac
aactacgatgcttttgtggtgtttgacactagcaagctagatgtaagggactgggtctac
aacgagctactggtccacctggagaactcggctcacagaaggttctgcctctgtttggag
gagagagactgggttcctgggttatcctgcatagaaaacctgcacaatgctgtgtccagc
agcatgaagaccgtgttcgtgctgtcgaatgatacccttgagccaatgagcggcgtgatt
cgccaggctttcttcatggtccagcagcggcttctggatgagaaggtggatgcagccgtg
ttggttctgttggatgagacgttccccaaagtgaagtacctacagctgaggaaaaggctg
tgcaggaagtccgtgctgtcctggcccaaaaacccgaaggctcagccgctcttttggaac
caagtgaggatggcactgtcatcagacaaccttagcttctatgacaacaatatgagt
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integrated database retrieval system
