Tetraodon nigroviridis (spotted green pufferfish): GSTEN00028238G001
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Entry
GSTEN00028238G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04120
Ubiquitin mediated proteolysis
tng04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
GSTEN00028238G001
04120 Ubiquitin mediated proteolysis
GSTEN00028238G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tng04121
]
GSTEN00028238G001
Enzymes [BR:
tng01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
GSTEN00028238G001
Ubiquitin system [BR:
tng04121
]
Ubiquitin ligases (E3)
U-box type E3
GSTEN00028238G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-ProteinID:
CAG07543
UniProt:
Q4RVN9
LinkDB
All DBs
Position
9
AA seq
1388 aa
AA seq
DB search
KIRRRRLARLAGGQTSQPSTPLSTPLTSPQRETPPGPLPGPSGATTQPLPAASQSLGLNV
HSGTPATSPVGTAGVAYGSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDTASCEKSM
SQVDVDSGIENMEVEESDRREKRNLTEKVNISTGTFKQSMSIYVKEPSTNSDVSEEQALQ
LICRILRVSWKEQDRDVIYLPSLAIEFHQNPKAVFSDFKDLIGQILMEVLMMSTHLRIHN
PFASLTATSEPIATARSPDHRMTLAQPSSHGGSPMGPGLGSFGASSLGTSSSFPAPTIFS
VPPPPPSPSTPQFVVPPSPPTPATQRHTLNAASSPMPISQRYRPYSVTSPWTAPSPTSPG
YRGFGFSGPFPSPAGPPVPPNTPVPAPSLNHQPLSLSSPRAHNPPSSAIPLVVPSSLRSN
AHPAAFASRIPPSSPLSFLFHALSDMSQGSSDEDSEEEEDFARVQFGSSLGACGGGASCD
SPSDRFTIETCKETEMLNYLIERFDSVGIEERKAPKMCSQPNVSQLLSNIRSQCISHVAL
ILQGTLTHPRSPLQQSLLVPYMLCRNLPYGFIQELVRVTHQDDEAFRQIFVPILHGLALA
MKECSFDSDNFKFPLMALAELCEIKFGKTHPVCSLITSLPLWCPKPLSPGCGREIQRLSY
LGAFFSLSVFAEDDTKVGEKYFSGPAITMENTRVVSQSLQHYLESARGDLFKMLHNILLN
GETRESALNYMAALVNYNVKKAQMQTDDKLVSTDGFMLNFLWVLQQLSMKIKLETVDPYY
IFHPRCRLVVSPEETRLKATMEELKSWLTELNEDPRKFSEPKFPTECFFLTLHTHHLSIL
PSCRRYIRRLRAIRELNRTVEELKNSESQWKDSPLASRHREMLKRCKTQLKKLVRAKACA
DVGLLDENLLRRCLQFYSTVIQLILRMVDPAYPNTDEVTETLTDVTCLFSRSITLPLNSE
IPKSFAALPEFYIEDVAEFLLFVVQYSPQVLYEPCVQDIVTFLVVFICSQNYIRNPYLIA
KLVEVLFVTNPAVQPRTQRFSEMMENHPLSIKQLVPALMKFYTDVEHTGATSEFYDKFTI
RYHISTIFKSLWQNLAHHGTFMEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQ
EEMRNKEQWDQLSREQQQSRQSQLTQDERVSRSYLALATETVDMFHILTKQVQKPFLRPE
LGPRLAAMLNYNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIA
DDQRSYSRELFEEVISKMRKAGIKSSIAIEKFKLLLEKVEEIVAKNSQSEMDYSDAPDEF
KDPLMDTLMTDPVMLPSGNVMDRSIILRHLLNSSTDPFNRQPLTESMLESVPELKERIQA
WMREKQSG
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
aagattcgtagaaggcgacttgcacggttggcaggtgggcagacgtcccagcccagtacc
cctcttagtacgcccctgacttccccacagagagagaccccacctggaccccttcctgga
ccctcgggagccacaacccagccgttaccagcagcctctcagtctttaggactcaacgtt
cacagtggcacccctgccacttccccagtgggcactgctggtgtggcatatggaagtcag
agcagcgagggtgttagctccctctccagctccccctctaacagcctcgagacccagtcc
cagagtttgtcacggtcacagagcatggacattgacactgcctcctgtgaaaagagcatg
tcccaggtggatgtggactcagggatagagaacatggaggtggaggagagtgatcgcagg
gagaagagaaacttgactgaaaaagtaaacatcagtactggaaccttcaaacaatctatg
agtatttacgtgaaagaaccctctacaaactcggacgtgtcagaagagcaggccctgcag
ctcatctgtaggatcctccgtgtgtcgtggaaggagcaggatagagacgttatctacctt
ccttcactggccatagagttccatcagaaccctaaagctgtgttctccgactttaaagat
ctgattggccagatcttgatggaagtcttaatgatgtctactcacttacgtattcacaac
cctttcgccagcttaaccgccacttctgaaccaatcgcaacagccagatctcctgaccac
cgcatgacgttagctcagccctccagccacggcggcagtcccatgggtcccggtttaggt
tcctttggagccagctctctggggacctcctcatcttttcctgcccccaccatcttctcc
gtacctcctcctcctccttctccatctacgccacagttcgttgttcccccaagcccccct
acacctgcaactcagagacacactctgaatgctgcttcttcccccatgcccatctctcag
cgttaccgcccctactccgtcacgtctccctggacggccccttccccgaccagccctggc
tacagaggcttcggtttctctggaccctttcctagtccagccgggcctccagttcctccc
aacacccctgttcctgctccatctctgaatcaccagcccctgtctttgagttcacccagg
gctcacaacccaccttcttctgcaattcccctggtggtgccctcctctctcagatcaaat
gcccacccggctgcctttgcttccaggatcccaccttctagccccttgtcgttcctgttc
catgccctgtctgacatgtctcagggcagcagtgatgaggattctgaagaggaagaggat
tttgcacgggttcagtttgggtccagtcttggtgcatgtggtgggggggcgtcctgtgac
tcacccagtgaccgcttcaccattgaaacgtgcaaagagacagagatgctgaactacctc
atcgagcgatttgacagcgttggcattgaggagaggaaagctcccaagatgtgcagccaa
cccaacgtcagccagctcctcagcaacattcgctctcagtgtatttcccacgttgcgctc
atcctgcaaggcaccctgacccatcctcggagcccgctccagcaatccttgctggtacct
tatatgttgtgtcggaaccttccatatggcttcattcaggagctggtgcgcgttacacac
caggacgacgaggcgttccgacagatattcgtccccatcctccatggcctggcgctggcc
atgaaagaatgttcctttgacagtgataactttaaattccctctcatggcattagcagag
ctctgtgaaatcaagtttggaaagactcacccagtctgtagtttgatcacctcgctccct
ctgtggtgtccaaaacctctgagtcctggctgtggcagagagatccagagactgtcctac
ctgggagccttcttcagcctctctgtctttgctgaggatgatacaaaagtgggagagaag
tatttctctgggccagctatcaccatggagaacacgcgagtcgttagccagtccttgcag
cactacctggagtcagcacgaggtgatcttttcaaaatgctccataacattttactaaat
ggagaaacgcgtgagtcagcgcttaattacatggcagctctagtcaactacaatgtgaag
aaagctcagatgcagactgatgataagctggtatccacggatggcttcatgctcaacttt
ttatgggtgctgcagcagctgagtatgaagatcaaactggaaacagtggacccttattat
attttccacccacgttgtcgccttgttgtcagtccggaggagacccgcctgaaagccacc
atggaggagctcaaaagctggcttactgagctaaatgaagatccccgcaagttctcagaa
cccaaattccccactgagtgtttcttcctgacactgcacacccaccatttgtccattttg
ccaagctgccggcgctatattcgcaggttgcgagcaatccgtgaactgaacaggactgta
gaagagttaaagaacagtgaaagccaatggaaagattctccccttgctagtcgacacaga
gagatgctgaagcggtgcaaaacacagctcaagaaacttgttcgagccaaagcttgtgct
gatgtgggccttctggatgagaacctgctgcgccgatgtctgcagttctacagtacagtc
atccaacttattcttcgcatggtggaccctgcttaccccaacacagacgaggtaacagaa
acgctgacagatgtaacatgtttgttctcgcgcagcatcacactgccactgaactccgag
attcccaaaagctttgctgctctgcctgagttctacatcgaggatgttgctgagtttctg
cttttcgttgtgcagtattctccccaggttttatatgagccatgtgtccaggacatcgtc
acctttttggtggttttcatctgcagccagaactatatcaggaacccttatcttattgcc
aagctggtggaggtgctatttgtcaccaacccagcggtccagcctcgtactcagcgattc
tctgaaatgatggagaaccacccgctgtccatcaaacagctggttcctgccctaatgaaa
ttctacaccgatgttgagcatactggagccaccagcgaattctatgataagtttacaata
cggtaccatatcagcactatcttcaagagcctctggcagaatcttgcccaccatggcacc
ttcatggaggagttcaactccggcaagcagtttgtgcgctacatcaacatgctgattaac
gacaccaccttcttgttagatgaaagcttggagtctctgaagcgtatccacgaggttcaa
gaggagatgaggaataaggagcagtgggatcaactctccagggagcagcagcagagccgc
cagtcccagctgactcaggacgagcgggtttctcgctcctatctcgccctggccactgag
acggttgacatgttccacatcctgaccaagcaggtccagaagcctttcctcaggcctgag
ctggggcctcgtttagccgccatgctgaactacaacctccagcagctctgcgggcccaag
tgtcgcgacctcaaggtggaaaaccctgagaaatatgggtttgagcccaagaagctccta
gaccaactgaccgatatctacctgcagctagactgtgcccgcttcgccaaagcaattgca
gatgaccagaggtcctacagccgcgagctctttgaagaggtgatttcaaagatgaggaag
gccggtattaagtcctccattgccatcgagaagttcaagctgctgttggagaaggtggag
gaaatagttgccaagaactcgcagtctgaaatggattacagcgacgctcctgatgagttc
aaagaccccctgatggacacccttatgactgaccccgtgatgctgccttccgggaacgtc
atggacagatccatcatcttgcgccacctgctcaactcctccaccgacccgtttaacagg
cagccgctcacggagagcatgctggagtcagtccccgagctgaaggagaggatccaggct
tggatgagagagaaacagagcggc
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