Tetraodon nigroviridis (spotted green pufferfish): GSTEN00028391G001
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Entry
GSTEN00028391G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K06252
tenascin
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04510
Focal adhesion
tng04512
ECM-receptor interaction
tng04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
GSTEN00028391G001
04518 Integrin signaling
GSTEN00028391G001
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
GSTEN00028391G001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tng00536
]
GSTEN00028391G001
Glycosaminoglycan binding proteins [BR:
tng00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
GSTEN00028391G001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fibrinogen_C
fn3
EGF_Teneurin
EGF_TEN
EGF_Tenascin
Fn3_PBP1
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_3rd
EGF_2
Fn3_Dep-1_2nd
DUF7949
NDNF
DUF4249
Motif
Other DBs
NCBI-ProteinID:
CAG07652
LinkDB
All DBs
Position
15
AA seq
914 aa
AA seq
DB search
MTHSPLRRVLLLLGLVYAMSLFSAATNDPRASSSERGVTFSHVYKIDVAEGSSCKTEAPS
SLQTETTPNGENDLVFRHSIKLQTPKCDCDESESFKSLLYRVNGLEEEVTYLKSQCTQGC
CGGGGAAGLDTSCGGHGVYQHETCSCLCNPGWEGPDCSVSSCPDECNDNGRCVDGQCVCH
QGYTGDDCSQVACPGDCSDKGHCVDGRCVCFPHFTGDDCSIQKCPNDCAGHGRCVDGQCV
CDEGLYGEDCSSVFGPQGLRLVRLTDISLLVEWEPVSGAEHYILTYHPKNDEHSLQQVQV
PHKNSYLISGLTPGVTYIVQVHAVIKEVRSEADTIEATTDISGINDFQVLGQTEVSIQVG
WKNPPAEVDYFRLTATDPSGQEEELSVQRSQEARTKHTILGLFPGTDYQISVQAVKGAVE
GKPSSVTGGTDIDVPGNLVAIDVTEDTVTLSWDRVRADVEGYMLSYTSAEGSSSDIPVGR
YSTSYKLIGLKPGVLYNVYIWAFKEDKVSKKSSTEAETGIFERAIGTNRDELDAPSDLSA
QDVTESSFTVSRDSTQVHIDGYFLSFSSSAGSNIDAPSELKATDVSVDSSVLTWVPPLAD
IDGYILTYEHEDGEMKAVEKQLGHSESRFALSGLETGQRYSVTIIAYRGNKRSKAAQTIF
KTGLCIPATASAAGLAGPQTLSPLSSSLINAFTCSLPVGTLYPFPMDCLQIMKNGNKKSG
IFTVYVNNDRSKPVEAYCDMETDGGGWLVLQRRTSGKLDFLKRWRQYLAGFGNMTDEFWI
GLDNIYELTNTPTRYELRFDLGLGPDRAYAVYDNFKIASAKQKFKLTIGKYSGTAGDAMT
YHQGQSWTTVDSDNDIALSNCALSHRGAWWYKNCHLANLNGNWGDNRHSMGINWKPWKGH
LLSLDFTEMKIRPV
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgacccacagtccgctgcggagggtcctgttgctgctgggtctcgtctacgccatgtca
ctcttcagcgccgccaccaatgacccgcgtgcctcgtcctccgagcggggagtcaccttc
agccatgtctataaaatagacgtggctgagggatccagctgcaaaactgaggccccgtct
agtctacagacagaaactactccaaacggagagaacgacctcgtttttaggcacagcatc
aagctgcagacgccaaaatgtgactgcgacgagtcagaaagcttcaagtctctcttgtac
agagttaatgggctggaggaagaagtcacctatttaaagagccagtgtactcagggatgc
tgcggtggaggcggtgctgcaggcctggacacgagctgcggtggccacggtgtgtaccag
catgaaacctgcagctgtctttgcaacccggggtgggaaggcccggattgctctgtgtcc
tcctgtcctgacgagtgcaacgacaacggtagatgcgtggacggccagtgtgtgtgtcac
caaggctacacaggggatgactgcagccaggtggcgtgtccgggtgactgcagcgacaag
ggacactgtgtggacggaaggtgcgtgtgcttcccacacttcaccggggacgactgcagc
attcagaagtgtcccaatgactgcgccggtcatggccggtgcgtggacggccagtgcgtc
tgcgatgaaggcctttacggagaggactgttcatcagtgttcggccctcagggactacgg
ttggttcggctgaccgacatctccctcctggttgaatgggagcctgtttctggggcagag
cattacattttgacctatcaccccaaaaatgatgagcattcactgcagcaggttcaagtt
ccccacaagaactcctacctcatctctgggctgactccgggggtcacctacattgtccag
gtgcacgccgtcatcaaggaagtgcgcagtgaagcagacacgattgaagcaaccacagat
atttcaggcataaacgactttcaggttcttgggcagacagaggtgtcgatccaggtgggc
tggaagaacccgccagctgaggtggactacttcagactgaccgccaccgacccgtccgga
caggaggaggagctgagcgtgcagaggagccaggaagcacgcactaaacacacaattttg
ggtctgtttccaggaacggactaccagatttcggtgcaggccgtcaaaggagctgtggag
ggaaagccgtcttctgtcactggcggcacagacattgatgttccaggcaacctggtcgcc
attgatgtaacggaggacactgtcacgctgtcatgggatcgagtccgtgccgatgtcgag
ggttacatgctgagctacacgtctgccgaaggctccagttcagacatcccagtgggacgt
tacagcacctcgtacaagctgatcggtttgaagcctggagttctttacaacgtctacatc
tgggccttcaaggaagacaaagtcagcaaaaagagttcaacagaggctgaaacaggtatt
ttcgaacgagcgattgggactaatcgagatgaactggatgctccttctgacctgtcagct
caagacgtgactgagtccagcttcactgtctcacgggattcgacccaggtccacatagac
ggttactttctaagtttcagctcttctgctggttctaacatcgacgccccatctgagctg
aaggcgacagacgtgtcggtcgattcttctgttctcacctgggttcctcctctcgctgac
atcgacggctacatcctcacctatgaacatgaggacggcgagatgaaggctgtggagaag
cagcttggacacagcgagagcaggtttgcactgtccggcctggagacgggccagaggtac
agtgtcaccataatcgcctacagagggaacaagaggagcaaagcagcccagaccatcttc
aaaacaggtctgtgcattcctgccactgcatctgctgcagggctggctgggccccaaact
ctgtccccgctgtcctcgtctctcattaatgcattcacgtgttctttaccagtcggtacg
ctctacccctttcccatggactgtcttcagatcatgaagaacgggaacaaaaagagcggc
atttttacagtctatgttaacaatgaccgctccaaacctgtggaggcctactgcgatatg
gagacggacggagggggctggctggttctccaaagacgtacaagtggcaagctggacttt
ctgaagcgctggagacagtacctagcagggtttggcaacatgactgatgagttctggata
ggtctggacaacatctatgagctcaccaacactcccactcgctatgagctgaggtttgat
ctgggcctggggcccgacagggcctacgccgtttacgacaacttcaagattgcgtcggcc
aaacagaagttcaaattgaccattggcaaatacagcggcacagcaggtgatgctatgacc
taccaccaaggccagtcctggactaccgttgactctgacaatgacatcgccctgagcaac
tgcgccctgagccaccgtggcgcctggtggtacaagaactgccacctggccaacctcaac
ggcaactggggagacaacaggcacagcatgggcatcaactggaagccatggaagggccac
ctcttgtcgctcgatttcacggagatgaagatccgaccggtg
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integrated database retrieval system
