Tetraodon nigroviridis (spotted green pufferfish): GSTEN00028622G001
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Entry
GSTEN00028622G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GSTEN00028622G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tng03009
]
GSTEN00028622G001
Ribosome biogenesis [BR:
tng03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
GSTEN00028622G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WD40
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
NBCH_WD40
WD40_RFWD3
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_IFT122_2nd
Beta-prop_SCAP
Beta-prop_WDR19_1st
WD40_like
WD_LRWD1
Chordopox_A30L
Motif
Other DBs
NCBI-ProteinID:
CAG07825
UniProt:
Q4RUV7
LinkDB
All DBs
Position
12
AA seq
489 aa
AA seq
DB search
MASFKPTKVQVYPKLGEKVTQDTLYWKNYKTPIQIKEFGAITSIDFSPVAPHNFAVTAFT
RVHIYGPFSQEPVKTFTRFKDTAYSGKFRSDGQLLVAGCEDSVVRLFDVSGRVALRTFKG
HTKAVHVTDFTSNHYQIMTASDDYTCRVWDIPNATAVNTYQEHTDYIRCGVTSKLNGDLF
ITGSYDHKMKVFDARMDKSVLTMDHGQPVESLLLFPSEGLLVSAGGRYVKVWDLLKGGQQ
LVSLKNHHKTVTCLHLGSNGQRLLSASLDRHVKVYNTTNYKVVHNFDYPASILSLALAVI
IVVGMTNGILSVKHKKSPEESKEGSGQARRQPSYRVFVKGKNYVPKQDDFLVSKPVKQHL
AKYDKQLKKFNVSQALDTALAAGVRHRKPEITVAVIKELDRRGTLKNALAGRDEQGLSHL
LNFLISNLTDSRFTPVLVVAAEMLFDIYRSVIGQSSVVDNQLQRLQDLIQREIDYQQRLV
EVLGMLDAL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcttccttcaaaccaacaaaagtccaagtataccccaaacttggagagaaagttaca
caagacaccctgtactggaaaaactacaagactcccatccagattaaagaatttggagcc
attacgagcatagatttctcgccagtggccccacataactttgcagtgacggcatttaca
agagtccacatatatgggccattctcccaggagcctgtaaagacatttacaagatttaag
gacaccgcatatagtggcaagtttaggtcagatggacaactacttgtggccggttgtgag
gactctgtggtccggttgtttgatgtcagtggcagggtggctctcagaacattcaaaggg
cacacaaaggctgtccacgtcacagactttacttcaaatcattaccagattatgacagca
tcagacgattacacttgtcgagtttgggacatcccgaacgcaacagcagtcaacacatat
caggaacatacagattacatccgctgtggtgtcacaagcaaactcaacggggatctcttt
atcactggctcttacgaccacaaaatgaaagtgtttgatgccagaatggataagagtgtg
ttgaccatggaccacggtcagccagtggagagcctgcttctctttccttctgaggggctt
ctcgtctctgcaggtgggcgatatgtgaaagtttgggatctgctaaagggaggccagcag
ctggtgtcactgaaaaaccatcataaaacggtcacttgtttgcaccttggcagtaacgga
cagaggctcctctcagcttcccttgacaggcatgtaaaagtgtacaatacaactaactac
aaagtggtccacaactttgactacccagcttccatcctcagtctggctttggctgtaatc
attgttgtgggtatgactaatggcattttaagtgtcaaacacaagaaaagccccgaggag
tcaaaagaaggctctggccaagcaaggcgacagccctcctatcgtgtttttgtgaagggg
aagaactatgtccctaaacaggatgactttctcgtcagtaaaccggtgaaacagcacttg
gccaagtatgacaaacagctcaagaaatttaatgtatcacaagctttagatacagcactg
gcggcaggggtcaggcatagaaagccagagatcacagtggctgtcataaaagagctggat
cgaagaggaactttaaagaatgctctagcaggaagagatgaacaaggactctcacactta
ctcaactttctcatatcgaatttgactgacagccggtttacgcctgtcttggtagtagca
gccgagatgctctttgacatctatcgttccgtaatcggccagtcgtcagtggtggacaac
cagctgcagcgtctccaggacctgatccagagggagatcgactatcagcagcgtctggtg
gaggtgctgggaatgttggatgcactc
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integrated database retrieval system
