Tetraodon nigroviridis (spotted green pufferfish): GSTEN00028953G001
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Entry
GSTEN00028953G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K04819
5-hydroxytryptamine receptor 3
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
GSTEN00028953G001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tng04040
]
GSTEN00028953G001
Ion channels [BR:
tng04040
]
Ligand-gated channels
Serotonin (5-HT3)
GSTEN00028953G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-ProteinID:
CAG08082
UniProt:
Q4RU50
LinkDB
All DBs
Position
1
AA seq
1044 aa
AA seq
DB search
MFNCVCPVKEWDIEGLSWDAEECGTQRVSLPREKLWIPDIHITEFMDEDKSPRTPYVYIY
NTGHVFDDSPLRVVSTCKLGIYSFPFDIQNCSLTFGSYIHFDTDIQMFASTTAAEILEES
LSVAQTKGEWELINIQVFPSVLEITDGKYSQLKYYLILRRRPILYVINLILPSIFLVTLD
VFSFLLPPHSVDRSSFKMTLILGYTVFLLLMNDLLPVTGNETPLLNVFFSLSFALMVASL
LATLFITNIYFCSAHFGAVPHWLRTLMLKYAAVIVCLPPKKRSNRITVSLHENGKDLAPT
VISSSDLQGLSEAPSVEPPNNSILTEVKKLAKDLFVDLLSYRNEELCQKVPSASPAGGLW
CFIGLVFRPLCGSVCWCELSCEEGHSGPTYESLQAVFDLQAFRPAVNLSRPTTTNISFTL
YAVLGVNEKTQILSTFLWLRLFWHHDFLVWDPDECDGVTKISLPVKNLWSPDIIVYELSV
SLNNHPLTRMVCFTCFPFLMVTMKGSFTYSVDDDVSQACPYVYVNHTGHIRWDRMLRLVS
ACNLRDLQLSLRLKDVRVGPALTFEEMSKNSKRYLEASGEWELMDILGETSILQFGIDEW
DIITFWVVIRRRPVLYVAHVRYQNFNRSVGTWTSSTATWPPCRRRASCGTSGATSATSWT
FSSSASTCCSSPATLWWSSSCGASGSDAVSQALTMLIWQVLGLTIPTVPWLLQEWDIEEL
SWDERECGAREDKSPVIPYMYLFNTGGVYDDRPIRVVSSCKLEIYTFPFDIQNCTLTFGS
YMHYGLTFGLFGTKASDIRMTPGNTAEEALQESRQVFVTNGEWSLADIQISPFTLSLDED
SYSEVKYFLILRRKPINYVVNLLIPSCFLIMVDIFSFLLPPHSVDRSSFKMTLILRLHRL
PAHHERPAARHRGPDAAHQRLLLHQPGPDGGQPAGDGDNHKYPAKLHPRPHPRLAQDPGV
TLPGLRRLSPSTQEEEGGGQALPGEPLDEGVGDDREGAGPFPLRPLHHPHHGHLRHHHRH
LDLEQLIRTLSWTLEINPGFKLLL
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgtttaattgtgtgtgtccggtcaaggagtgggacattgaaggactaagctgggatgcg
gaggagtgtgggacgcagcgagtgtctcttccacgggagaaactgtggatcccagacatc
cacatcacagagtttatggatgaggataaatctccacggaccccttatgtttacatatac
aacacaggccacgtgttcgacgacagcccgctcagggtagtcagcacctgcaaattaggg
atctacagtttcccctttgacatccagaactgctccctgacctttgggtcatacattcac
tttgacacagacattcagatgtttgcctccaccactgctgcggagatcctggaggagtcc
ctcagtgtggcgcaaaccaaaggagaatgggagctcatcaacatccaagtatttccatct
gttctggagatcactgacggcaaatactctcagctcaagtactatctgatcttgagacgt
cggccgatcctctacgtgataaacctgattttacccagcatctttctggtcacgctagac
gtcttcagcttcctgctgcccccccacagcgtggaccgctcctccttcaagatgaccctc
atcctgggctacacggtgttcctgctgctgatgaacgacctgctgcccgtcaccgggaac
gagacgcctctcctcaacgtgttcttctcgctcagcttcgccctgatggtggccagcctg
ttggccacgctgttcatcaccaacatctacttctgctcggctcactttggcgcggttccc
cactggctccgcaccctcatgctgaaatatgctgctgtcattgtttgtctccctccaaaa
aagagaagcaaccgtatcacagtttctcttcatgaaaacggtaaagacctggctcccacc
gtcatctcctccagtgacctccaggggctctctgaggcgccgtcagtcgaaccccccaac
aacagcatcctgacggaggtgaagaagctggccaaggacctgtttgttgatctactttcc
tacagaaatgaagaactttgtcagaaggttccaagcgcctctcctgctggtggcctgtgg
tgttttatcggcctggttttccgacctttgtgtgggtcagtgtgttggtgcgagctgtcc
tgtgaggagggccacagcggacccacgtacgagtccctgcaggctgtgtttgacctccaa
gccttcaggccagccgtcaacctcagcagacccacaaccaccaacatctccttcaccctc
tacgcggtcctgggcgtgaatgagaagactcagatcctctccacattcctgtggctgcgg
ctgttttggcaccacgactttctggtttgggacccggatgaatgtgatggcgtcaccaag
atttctcttccagtgaagaacctctggtctccggacatcatcgtatacgagttgtcagtc
tctctaaacaaccacccactaacccgcatggtttgttttacatgtttcccctttttgatg
gtgaccatgaagggttcttttacctacagcgtggatgacgacgtttcccaggcgtgtccc
tacgtctacgtgaaccacaccggtcacatccgctgggaccggatgttgcgtctggtctca
gcttgcaacctgagagatcttcagctttcccttcgactaaaagatgtgagggtcggtcca
gctctgacgtttgaggagatgtccaagaactccaaacgttacttggaagccagcggagag
tgggagctgatggacatactgggagagacctccatccttcagtttgggatcgatgagtgg
gacatcattaccttctgggtggtcatcaggcgtcggccggtcctctacgtggcgcacgtt
cgctaccagaacttcaacagatctgtcggtacctggaccagctccacggccacgtggcct
ccctgcagaaggagagcgagctgcgggaccagtggtgccacgtcggctacatcctggact
ttctcctcttccgcatctacctgctgctcatctcctgctacgctttggtggtcgtcttca
tgtggtgcgtctggatcagatgcggtgtcccaagccctgacgatgctcatctggcaggtt
ctgggactgaccattcccaccgttccctggttgctgcaggaatgggacattgaagagctg
agctgggatgagcgggagtgcggagccagagaggacaagtctccagtaattccctacatg
tacttgttcaacacgggtggcgtgtacgatgacaggcccatcagggtggtcagctcctgc
aaattagagatctacacttttcccttcgacatccaaaactgcactctgaccttcggctcc
tacatgcactatggcctgacctttgggctctttggcacaaaagcctcagatataaggatg
accccagggaacacggcggaggaggcgctgcaggaatccaggcaggtgtttgtgaccaac
ggcgagtggagcctggcggacattcaaatctcccccttcaccctctcgctggatgaagac
agctactccgaggtcaaatactttctcatcctgaggcgcaaacccatcaactacgtggtc
aacctgctgatccccagctgcttcctcatcatggtggacatcttcagcttcctgctgccc
ccccacagcgtggaccgctcctccttcaagatgaccctcatcctgcggctacaccgtctt
cctgctcatcatgaacgacctgctgcccgtcaccggggaccagacgccgctcatcaacgt
cttcttctccatcagcctggccctgatggtggccagcctgctggagacggtgataatcac
aaatatccagctaagctccacccacggccccatccccggctggctcaggaccctggtgtt
acactacctggccttcgtcgtttgtctccctccacccaagaagaagagggcggtggacaa
gcacttccaggggagccgctggacgaaggagtgggagatgatagggaaggtgctggaccg
tttcctcttcggcctctacatcatcctcatcacggtcaccttcgtcaccatcatcgccat
ctggatctggaacaactcatacgaacgctgagctggacgttggaaataaacccaggtttc
aaacttttgctttaa
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