Tetraodon nigroviridis (spotted green pufferfish): GSTEN00029055G001
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Entry
GSTEN00029055G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K10756
replication factor C subunit 3/5
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03030
DNA replication
tng03410
Base excision repair
tng03420
Nucleotide excision repair
tng03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GSTEN00029055G001
03410 Base excision repair
GSTEN00029055G001
03420 Nucleotide excision repair
GSTEN00029055G001
03430 Mismatch repair
GSTEN00029055G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tng03032
]
GSTEN00029055G001
03036 Chromosome and associated proteins [BR:
tng03036
]
GSTEN00029055G001
03400 DNA repair and recombination proteins [BR:
tng03400
]
GSTEN00029055G001
DNA replication proteins [BR:
tng03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
GSTEN00029055G001
DNA Replication Termination Factors
ELG1-RFC complex
GSTEN00029055G001
Chromosome and associated proteins [BR:
tng03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
GSTEN00029055G001
DNA repair and recombination proteins [BR:
tng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
GSTEN00029055G001
Check point factors
HRAD17(Rad24)-RFC complex
GSTEN00029055G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_11
AAA_22
AAA_24
AAA_16
AAA_14
RuvB_N
DEAD
AAA_assoc_2
ResIII
DUF815
PhoH
AAA_7
AAA_30
AAA_5
ATPase_2
AAA_19
TIP49
DNAX_ATPase_lid
AAA_2
AAA_25
Thioredoxin_6
Glyco_hydro_57
Motif
Other DBs
NCBI-ProteinID:
CAG08161
UniProt:
Q4RTX1
LinkDB
All DBs
Position
12
AA seq
335 aa
AA seq
DB search
MSATTKAPLQTRNLPWVEKYRPQKLDDLISHKDILSTIQRFISEDKLPHLLFYGPPGTGK
TSTILACARQLYRDKEFNSMVLELNASDDRGIDVVRGPILSFASTRTIFKKGFKLVILDE
ADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSPDQMVPRL
EHVIQQESIDVTPDGMKAIVTLSSGDMRRSLNILQSTSMAYGKVTEDTVYTCTGHPLRSD
IANILDWALNKDFTTAYRQILELKTLKGLALHDILTEVHLLIHRVDFPPNIRIGLLIKLA
DVEHRLASGTDEKIQLSSMVAAFQAVRDLVVSEAS
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaacaactaaagcaccgttacagacgagaaatttaccctgggtagaaaaatac
agaccgcagaaactcgacgatctgatctcgcacaaagacattctcagcaccattcagagg
tttatcagcgaggacaagctcccacatctcctgttctacggcccccctggaacagggaaa
acctccaccatcctggcctgtgcccgacagctgtacagggacaaggagttcaactccatg
gtgctggagttaaatgcatcagacgaccgaggtattgacgttgttcggggtccaattttg
agttttgccagcaccaggaccattttcaagaagggcttcaagttggttatactggatgag
gctgatgccatgacccaggatgcccagaacgcactgcggcgagtcattgagaagtttaca
gaaaacactcgtttctgtctgatctgcaactacctgtcaaagatcatcccagctctgcag
tctcgatgcaccaggtttcgcttcggcccgctgtccccagatcagatggtgccccggctg
gagcatgtaatccagcaggagagcattgatgtaactcctgacggaatgaaggccattgtg
actttatcgtcaggcgacatgagaaggtctctcaacatattgcagagcaccagcatggct
tatggaaaggtcacagaggacacggtctacacgtgcacaggtcaccccctccgctccgat
atagccaacatcctggactgggccctcaacaaagatttcaccacagcctacaggcagatc
cttgagctcaagactctgaaaggtttggccctgcacgacattcttaccgaggttcacctg
ctcatacacagagttgactttcctccaaatattcgaattggcctgctcatcaaactggct
gacgtggagcacagactggcctcggggaccgatgagaagatccagctcagctccatggtt
gcagccttccaggcagtgagggacctggtggtgagtgaggcctcc
DBGET
integrated database retrieval system
