Tetraodon nigroviridis (spotted green pufferfish): GSTEN00029171G001
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Entry
GSTEN00029171G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tng03021
]
GSTEN00029171G001
Transcription machinery [BR:
tng03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
GSTEN00029171G001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
ResIII
PhoH
Motif
Other DBs
NCBI-ProteinID:
CAG08244
UniProt:
Q4RTN8
LinkDB
All DBs
Position
2
AA seq
965 aa
AA seq
DB search
MGDDDHRVPEKAERSISTSSVGGVRADKLSTQDLQKKSDLKKPADDNTSTVVKNVEDSSS
SSLTQASKASGGHTPDPPAQSADSGPHPANRSQRDDDDEDVVLVSVKPAAQKSPATAVQQ
SLTAFPGFQPASRIKPADDPRGLRRLYTTQLQQVKSTLSVVNVAALPDQGERLRTQVRQL
EEALASLSLGQASGPDSQVEMNESGAGPSKKEVNPVNRPGGTIHLPSVPSQQASSSAAGP
QMSQGFSQMSGANSQVQAFYGGRMTEDRLLAVKNATGEAIDHLHRSLESCPGAEAEAPDP
RGLKVSLLAHQRRALAWLLWRETQKPCGGILGKSSNHILFFPCMKVTNHLFFCCCFFPNA
ADDMGLGKTLTMISLILTKKISEKGKDDKKEVKRPEKWISKTDSTLVASKGTLIICPASL
VHHWEREISRRVKSSRLSVCLYHGSDRERRAEALADYDVVVTTYSLVSKEMPVPKEKKEE
EEDLTALSASAPLLRVSWDRVVLDEAHNIKNPKAQTSMAVCRLRARARWAVTGTPIQNNL
LDMYSLLKFLHCSPFDEFKLWKAQVDNGSRRGRERLNILTRSLLLRRTKDQTDATGKPLV
CLPDRKSEVHRLKLSKEEQAVYDVVFAQSRSTLQNYLKRHEGTDVGKGSASSSNPFDKVA
QEFGLSQAAAPASSSQPPQPASSTVHILSLLLRLRQCCCHLSLLKKTLDSSELSGDGIVL
SLEEQLSALSLTSSPSQPGPDSKDIVALNGTRFPSQLFEETSESTKVENYSPAIFSTSRP
FKAFNFSNYSSLLQISAIVSELKMIREKYSDQKSVIVSQWTSMLRIVAVHLRRIGLRYGI
IDGTVNPKQRMDLVEEFNTNAKGPQVMLVSLCAGGVGLNLIGGNHLFLIDMHWNPALEDQ
ACDRIYRVGQTKDVTIHRFECEGTVEEKISTLQVKKKELAQNVLSGTGKTFTKLSLADLR
IIFGV
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatgacgaccaccgagtgcctgaaaaagcagagagaagtatttctacctcctcc
gttggaggtgttcgtgctgacaaactaagcacacaggatctgcagaagaagtcagacctc
aagaagccagctgatgacaacacatctacggttgtcaagaacgtcgaggactcttcatcc
agcagtttgactcaggcttccaaagcctcgggtggccacacccctgacccaccggcccag
tccgcagactctggcccccatccagccaaccggagccaaagggatgacgacgatgaagat
gtggtgctggtgtcggtgaaaccggctgctcagaagtctcctgcaaccgctgtccagcaa
agcctgactgccttccctggatttcagccagcctccaggatcaagcccgcagacgacccc
agaggactgcggaggctgtacaccactcagctccagcaggtaaagagcaccctgtctgtg
gtgaacgtggctgcgctgccagaccaaggcgagaggctgcggactcaggtccgacagctg
gaggaagcgctggcatcgctgagcctcggccaggcctccggcccagactcccaggtcgaa
atgaacgagagcggcgctggtcccagtaagaaggaggtgaacccagtcaaccggccaggt
ggaaccatccacctcccaagtgttccctcccagcaggcctccagcagcgctgcggggccc
cagatgagccagggattctctcagatgtctggagccaactcccaagtccaggccttttat
gggggccggatgactgaagaccgtctcctggctgtgaaaaatgccaccggcgaggccatt
gaccacctccacaggtccctggagtcctgccccggtgctgaagctgaggccccagacccc
agaggccttaaggtgtcgctcctggcccatcagaggagagctctggcgtggctgctgtgg
agagaaactcagaagccctgtggaggcattctgggtaagtcctctaaccacattcttttt
tttccttgtatgaaagtaacaaatcacttgtttttttgttgttgtttttttccaaatgca
gcagatgacatgggtctggggaaaaccctgaccatgatttctctcatcctgaccaaaaag
attagtgaaaagggcaaagatgataaaaaggaggtgaaaaggccggaaaaatggatctcc
aaaaccgattccaccctggtggcttctaaaggtactctgatcatctgccccgcctccctg
gtccaccactgggagcgagagatctccagacgcgtgaagtcgtcccggctgagcgtgtgt
ctttaccacggttccgaccgggagagaagagccgaagcacttgcggattatgatgtggtg
gtgaccacatacagtttggtctccaaagaaatgccagtcccgaaggagaagaaggaggag
gaggaggatctgactgctctgtctgcatcggctccgctcctccgggtctcctgggacagg
gtggttctggacgaagctcacaacatcaagaacccaaaggcgcagacctccatggccgtg
tgtcggctgagggctcgcgcccgctgggccgtgaccgggacccccatccagaacaacctg
ctggacatgtactctctgctcaagtttctgcattgttctccgtttgatgagttcaaactg
tggaaagctcaggtggacaacggctcgaggaggggcagagagagactcaacatcctgacc
agaagcctcctgctcagacgcaccaaggatcagacggacgctacgggaaagcccctggtg
tgtctgcctgatcggaaaagcgaggtgcaccggctcaagctgtccaaggaggaacaggcg
gtgtacgacgtggtcttcgcccagtccagatctactctgcagaactacctgaagaggcat
gaagggactgacgtcggcaagggaagcgcttccagctccaatccctttgacaaagtggct
caggagtttggtttgtcccaggctgccgcgcctgcgtccagctcccagccgccccaacca
gcctccagcaccgtccacatcctgtcgctgctgctgcgcctccgacagtgctgctgccac
ctgtccctcctcaaaaagactctggactcctctgagctgagtggagacgggattgtcttg
tccctggaggagcaactcagtgcgctgtccctcacctccagcccttcccaacctggtccc
gactccaaagatatcgtggccctcaacggcacccggttcccctcacagctctttgaggag
accagtgagagcacaaaggtggagaactacagtcctgcaatcttttccacctcgaggcca
tttaaagcattcaacttttctaactattcttcacttttgcagatttctgcaattgtctct
gaactcaagatgatccgagagaaatattctgaccagaaaagcgtgatcgtgtcccagtgg
accagcatgctgcgaattgtagccgttcacctgcggagaatcgggctgagatacggcatc
atcgacgggaccgtcaaccccaaacagcgcatggatctggtggaggaattcaacaccaac
gctaaaggaccacaggtgatgctggtgtctttgtgcgctggaggagttggtctcaacctc
atcggaggaaatcacctttttctcattgacatgcactggaacccagccttagaggatcaa
gcatgtgacagaatctacagggttggacaaactaaagatgtcaccatccacaggtttgag
tgtgaaggcacagtggaggagaaaatttccacactgcaggtgaagaagaaggaactggcc
cagaatgtgctgtcaggaacaggaaaaaccttcaccaagctatccctggctgacctcaga
atcatttttggtgtc
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