Tetraodon nigroviridis (spotted green pufferfish): GSTEN00029221G001
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Entry
GSTEN00029221G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K10864
DNA mismatch repair protein PMS1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tng03400
]
GSTEN00029221G001
DNA repair and recombination proteins [BR:
tng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
GSTEN00029221G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HATPase_c
HMG_WDHD1
DUF1104
NatA_aux_su
Motif
Other DBs
NCBI-ProteinID:
CAG08289
UniProt:
Q4RTJ3
LinkDB
All DBs
Position
2
AA seq
854 aa
AA seq
DB search
MKQLPPDTVRLLSSSQVITSVVNVVKELLENSLDAGASNIDVKLENYGLERIEVRDNGHG
IKAADTAVMAVRHFTSKICTHEDLGHLETYGFRGEALGSICAVAEVTFVTVTTKTEEEDI
STQYTLNLTGGIVSQKPSHLGQGTTVSVLRIFKTLPVRRQYYSSTKKRKEELKKVQDLLL
AYAMIKPELRLTLVHDKVVVWQKAKVPDHRSALAATLGPSVVMNLVPCHHRQEQPEISLE
GFFPKPGADYSSTSTSGPDRTFTFVNNRPVHHKDIMKLLRQHYTAQYPADGARSRYPILM
LSVTVPPSAVDVNLTPDKTQVLLHDKEAVLTALEALLVSLYGFRPTEDPPAQRPPSSETW
SAPPEPQRDNRPASSDLLKDVTAARTEDSRASNGSSSSSQADDWVVNSSLDDQSCSLSAE
TSSGSEPPERPEDQVLSKSRERFSAEDWSRGTALCDPASGLPLQPVSIHQPLKASAPSPL
SPPDQKVPNAITEKRAALTAYDLIGHRATRAPLSPAALFEKEARADVLREQPAASLQDIS
AAVHQRWKNLREEDRKKYEEKAKKQQERHEQRSKLASAEGADPSARGQKRKAPLSNQKLL
DQLFSGQPQRKSGAPAPRPSLPLPCSVPSLRRRLERLSSQSGSAVPRGLRLVNRLASQSA
WVILCGQRLMLLNPFRVEEALLFKRLLENNILPAVSLQDPIQLTDGNLGGAEYTEALCNM
ETQGPGLSGEVFFCDPRLVANGFKVKLTPGCASAERHLEVTAMADYVPFLGVDDLREILT
AVLHRKARAVKECRPLKVANYLKGEAVRLARQLPTNLPREDVEETLRRMERQLGEEKCIH
GRPFLEHLADVPSS
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagctgcctccagacacagttcggcttctgtccagctcccaggtcatcacgtct
gtggttaatgttgtcaaagagctgctggaaaattcactggatgccggggcatccaacatt
gacgttaagctggagaactatggcctggagcgcatagaagtccgtgataacggccacgga
attaaagccgccgacaccgccgtgatggccgtcaggcatttcacctcaaagatctgcacc
cacgaggacctggggcatctggagacctacggcttccgaggagaggccctgggttccatc
tgtgccgtggctgaggtgacatttgtgacagtcaccaccaagacagaggaggaagacatc
agcactcagtacacactcaacctcacaggcggcatcgtttcgcaaaagccgtcgcacttg
ggtcaaggaacaacagtgagtgtgctgaggattttcaagactcttccagtgaggcgacag
tactattcttccaccaagaaacgcaaagaggaactgaagaaggtgcaggaccttctgctg
gcttatgccatgatcaagcctgaactgaggctcacactggtgcacgacaaagtggttgtg
tggcagaaggccaaagtccccgaccacaggagcgcgctcgccgccacgctggggcccagc
gtcgttatgaacttggtcccttgccaccatcgccaggagcaaccagagatctctttagaa
ggcttttttcccaagcctggagcagactactcctccacgagcacctccggccctgacaga
acattcacctttgtcaacaacagacccgtccaccacaaagacataatgaagttgctgcgg
caacactacactgcacagtatcctgccgacggagcccggagccgctatcccatccttatg
ctcagcgttacagttcctccgtccgcagtggacgtcaacctgacgccggacaagacccag
gttctcctccatgacaaggaggccgttcttactgccttggaggcgcttctggtttccctg
tatggctttcggcctactgaggaccctccagctcagcggccgcccagctccgagacgtgg
tccgcgccacctgaaccccagagggacaacagacctgcgtcctcagacctgctcaaagac
gtcacagccgcgaggactgaggacagccgggcctccaacggcagctcgtcatcctcgcag
gccgacgactgggtggtcaactcgtctctggatgaccaaagctgcagtctgtctgcagaa
accagctctggcagcgagccacccgagagaccggaggaccaggtcctgtccaagagcaga
gagcggttctcggctgaggactggagccgtggcacagccctgtgcgacccggcgtcagga
ctgcccctccaacccgtcagtatccaccagccgctaaaggccagcgccccctctccgctg
agcccccccgaccaaaaggtgccgaacgcaataacggagaaacgtgccgcgctgacggcc
tacgacctgatcggccaccgcgccacgagggcaccgctgtcccccgccgctctgttcgag
aaggaggccagggccgacgtcctcagggagcaacccgccgccagcctgcaggacatcagc
gccgccgttcaccagaggtggaaaaatctgagggaggaagatcgcaagaagtatgaagag
aaggctaagaagcagcaggagcgccatgagcagaggagcaaactggcctccgctgaagga
gcagaccccagcgccaggggccagaagcgcaaggccccgctgtccaaccagaaactgctg
gaccagctcttctccggccagcctcagaggaagagcggggctcctgcccccaggccctcg
ctgcccctcccctgcagcgttccctccctgcggcggcggctggagcgcctttcctcccag
agcggcagcgcggtgccgcggggcctccgtcttgtaaaccggctggcctctcagagcgcc
tgggtcattttatgtggtcagaggctcatgttgttaaacccattccgagtggaggaggcc
ttgctgtttaagagacttctagagaataatatactcccagcagtgagtctgcaggaccct
atacagttaacagatggcaatctcggaggagcagaatacacggaagctttgtgcaacatg
gagacccaaggccccgggctgagcggagaggtgttcttctgtgaccccaggctggtggcc
aacgggtttaaagtcaagctgactccaggctgcgcgtcagctgagagacatctggaagtg
acagccatggccgactacgtgcctttcctcggcgtggacgacctcagggagatcctgacc
gcggttcttcacaggaaggcgcgggccgtgaaagagtgtcgaccgctcaaggtcgcaaac
tacctaaaaggcgaagccgtacgactggcccgtcagctgccgacaaacctgccccgggag
gacgtggaggagacgctgcggaggatggagcgacagctcggggaggagaagtgcatccac
ggccggcccttcctggagcacctggccgacgtgccgtcctcg
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