KEGG   Tetraodon nigroviridis (spotted green pufferfish): GSTEN00029239G001
Entry
GSTEN00029239G001 CDS       T04346                                 
Name
(GenBank) unnamed protein product
  KO
K06485  integrin alpha 6
Organism
tng  Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04382  Cornified envelope formation
tng04510  Focal adhesion
tng04512  ECM-receptor interaction
tng04514  Cell adhesion molecule (CAM) interaction
tng04518  Integrin signaling
tng04810  Regulation of actin cytoskeleton
tng04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:tng00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    GSTEN00029239G001
   04514 Cell adhesion molecule (CAM) interaction
    GSTEN00029239G001
   04518 Integrin signaling
    GSTEN00029239G001
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    GSTEN00029239G001
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    GSTEN00029239G001
   04810 Regulation of actin cytoskeleton
    GSTEN00029239G001
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    GSTEN00029239G001
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tng04147]
    GSTEN00029239G001
   04515 Cell adhesion molecules [BR:tng04515]
    GSTEN00029239G001
   04090 CD molecules [BR:tng04090]
    GSTEN00029239G001
Exosome [BR:tng04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   GSTEN00029239G001
  Exosomal proteins of breast milk
   GSTEN00029239G001
Cell adhesion molecules [BR:tng04515]
 Integrins
  Integrin alpha subunits
   GSTEN00029239G001
CD molecules [BR:tng04090]
 Proteins
  GSTEN00029239G001
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 CLIPPER
Other DBs
NCBI-ProteinID: CAG08300
LinkDB
Position
1
AA seq 1044 aa
MCSEKVETQEACLDSPWPSTSSRTLPEGTCEYHISPVVLEYCRLSSLQVLLSRLLVGAPR
AKHQNQVNVTGVVYQCDLATTSERCQPIDFDNEEFLESKGIDGQWMGVRVTSQGPGKNVM
MCAHRYQHWTPHVSGPHLLTGQCYLLGDDLRAPTPGQKKTGRRVVCGLKHLDYQKDHLGF
AYCQQGHGASFAKDNQSLILGAPGAYDWKGIVHMEDIDNDPFPTNDPRETGDIEQFNQKL
IPLLSNSYLGQFEVFFFKQWLKEEVSHEVLRFGLPGFSADSGLALMGKGELIIVSGAPRG
GYGGQVAFLKPDPKHSENLSVEFVLSGPDLASSFGYDVAVVDLNGDGWEDLAVGAPQFYK
KEKLFGGAVYVYINNNGKNWEKINPIRLLGQQSSMFGLAVENIGDINQDNYGDIAVGAPY
DGSGRVYLYCGSSTGINKNAAQVLSPRSGSVTLFGYSLSGNLDVDDNQYPDLAVGSLSDS
VFVYRARPVVHIGSTLQVTPNNIDRDKIKEQCDMSLPSCSNFAARACFSYTAHPESFSPK
LILDYTFEADIKRKKARLPPRVDFLGVPRGRLELPGQKRKICTDIELRLLRDFKDWLHAI
PISVTASLGDSTQWTSERVTPVLDLFQPKYTVSEINITNRGCGSDNICQSNLSLEYRFCS
RQMENSKSVFRSLSRKDGVAVITPTEEDIALEMTVTNRGGDDAHQTRSIISLPDTLHYSS
VVTTASEPKVDCTANDKGTLIDCELGNPIEKDAEVTFYVMLTTSGISLSTKAVNISLQLQ
TTSTQVLKPVEASAKVFFELKLQLYGVARPSQVSFGRSLEGKSTINSVEEIGALVQYEFR
ITNLGRSLKYFTNASLNIFWPKENSLGKWLLYLTQTSNTGVQSVPCSPVKEINPLKNVKG
LSRKKREAELEALTSGDFSFLPTKRKYKTLTCADGLRCVEICCPLQGLDSTATVALHARL
WNATFMEDYSSFNYLVIAVDASLSLTNSPDNTGLKSDRLSTQVKLTVFLERQIEYYTKVA
WWIILLTVIALLLLLSVMVVLLWM
NT seq 3132 nt   +upstreamnt  +downstreamnt
atgtgctccgaaaaagtggagacccaggaagcctgtttggattctccgtggccctccacc
agcagcagaaccctgccagaaggaacctgtgagtaccacatatccccggttgtcttggaa
tactgccgcctctcatcgcttcaggtgcttttgtccagactgctggtgggagcgccgcga
gccaaacaccagaaccaggtcaacgttactggtgttgtttaccagtgtgaccttgcaaca
acgtcagagcgctgtcagcccattgactttgacaatgaagagttccttgaaagtaaagga
atagacggccagtggatgggagtgagggtgacaagccaaggtcctggaaaaaatgtgatg
atgtgcgctcatcgatatcagcactggacccctcatgtctccgggcctcacctgttgacg
ggccagtgttaccttttaggagatgacctgcgtgcaccgaccccagggcaaaaaaagacc
gggaggagggtggtctgtggcctcaaacacctcgattaccagaaggaccacctcgggttt
gcatactgccagcagggtcatggggcgtctttcgctaaggataaccagtctctgatactt
ggagcgccgggagcatatgactggaaaggaattgtacacatggaggatatagacaacgat
ccctttccaacaaatgaccctcgggagactggagatattgagcaatttaatcagaagctc
attcctctcttgtcaaacagctacttgggtcagtttgaggttttttttttcaagcagtgg
ttgaaagaggaagtttctcatgaagtgttgcggtttggtcttccagggttctccgctgac
tctggtctggctctcatgggcaagggcgagctgatcatcgtgtcaggagctcccagagga
ggttacggcggccaggtggcatttcttaagccagacccaaaacatagtgaaaacctgtct
gtggagtttgtcctctctggtccagacctggcctcctcctttggatatgatgttgctgtt
gttgatctcaacggtgatggatgggaggatctggctgtcggggctccacagttctacaaa
aaagagaagctgtttggaggagcagtctatgtctacattaacaacaatggaaaaaactgg
gaaaagatcaatccaattcggcttcttggacaacaaagctccatgtttggacttgcagtg
gaaaatataggagatatcaatcaagataattatggagatattgctgttggggcaccgtat
gatggttctggccgtgtgtatctttactgtggctcatcaactggcatcaacaaaaacgca
gcacaggtgctctcaccaagatctggatctgtgacgctctttggatattctctgtctggg
aacttggacgtggacgataatcagtaccctgatttggccgtgggatctctgtccgattct
gtctttgtttatagagcgaggcctgtggtccacattggcagcactctgcaagttacacct
aataacatagacagggataaaataaaagagcagtgtgacatgtctttgccatcgtgcagc
aattttgcagctcgggcatgtttttcctacacggcgcatcccgagtcattcagccctaaa
ctgatacttgactatacttttgaggctgatatcaagaggaaaaaagccaggctgcctcct
agagtggattttctgggggtgcctcgagggaggctggagctgccgggacagaagagaaaa
atctgtactgacatcgaattaagactcctgcgggatttcaaagactggctgcacgctatc
cccatctcggttaccgcgtctctgggggactccactcaatggaccagtgagcgtgtaaca
cctgtactggatctcttccagccaaaatacaccgtctctgagatcaacatcaccaacaga
ggctgcggcagcgataacatttgtcaaagtaacctcagtttggagtacaggttctgctcc
agacaaatggaaaacagcaaaagcgttttcagatcactcagcagaaaggatggcgtagcg
gtcatcactccaaccgaggaagacatcgctctggagatgacggtgaccaacaggggcgga
gatgacgcccaccaaacccgctcaatcatcagcctgccagacactctccattactcgtct
gttgtcaccacagcttcagagccgaaggtggactgtacagccaatgacaaagggactcta
atcgactgtgagctgggaaacccaattgagaaagatgcagaagttactttttatgtgatg
ctaaccacatcaggcatctcgctgagtacaaaggctgtgaatatctctctacagcttcaa
acaaccagcacacaggtcttaaaaccagttgaggcatcggccaaagtgttttttgaactg
aaactgcaattatacggagtagccaggccatctcaagtgtcttttggcagaagcttggag
ggcaagagcaccataaactctgtggaggaaatcggagctttagttcagtacgaatttagg
ataacaaatctgggtagatccctgaaatacttcactaatgcatcactgaacatcttctgg
ccaaaggagaattctcttggaaagtggctcctgtacctgactcagaccagcaatacaggt
gtccagtctgtgccttgctcccctgtaaaagaaatcaatcctcttaagaatgtaaaggga
ctctccaggaaaaaacgtgaagcagaactcgaggcactcacgagcggtgacttctcattt
cttccgacaaaaaggaaatacaaaaccctaacctgcgcagatgggctaaggtgtgtggag
atctgctgccccctgcagggtctagacagtactgccacggtggctctgcacgctcgtctc
tggaacgccacattcatggaggattacagctcctttaattatttagtgattgctgtggat
gcgtctctcagtttgacaaactctccagacaacactggactgaaatctgacagacttagc
acacaggtgaagctaacggtattcctggagagacagatcgagtattacaccaaagttgcc
tggtggatcatcctcctcactgtcattgcgttgcttttgttgctgtcagtgatggttgtc
ttgttgtggatg

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