Tetraodon nigroviridis (spotted green pufferfish): GSTEN00029297G001
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Entry
GSTEN00029297G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K16499
protocadherin delta 2
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tng04515
]
GSTEN00029297G001
Cell adhesion molecules [BR:
tng04515
]
Cadherins
Protocadherins
GSTEN00029297G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PepSY
Cadherin_C_2
Motif
Other DBs
NCBI-ProteinID:
CAG08342
UniProt:
Q4RTE0
LinkDB
All DBs
Position
1
AA seq
924 aa
AA seq
DB search
VPFLLFLVGTEAVINLKYGINEEMKPGSVIGNVTKDALKQGFQIAPQPPYLRVISNSEPR
WVELSPAGILTTQMKIDRDVVCRQNPKCVISLEVMSNSMEICVIKVEIEDLNDNAPRFPT
NHIDIEISENASPGTRFPLEGASDPDSGIFGVQSYSITPNELFGLEIKTRGDGSKIAELV
VQKSLDRETQSHYTYEISAEDGGDPPKIGAVQLNIKVIDSNDNNPVFDEAVYTVNVMENS
PINTIVIDLNATDPDEGTNGEIVYSFHSYVTEKTRDAFKIDPRTGIITVNGVLDYETAQI
YEIDVQAKDLGPNSIPAHCKVTVNVMDTNDNPPVISLLSLNTEMVEVSENAQRGYVIALV
RVSDKDSGANGKVQCRLQGNVPFRLQEYESFSTILVDGRLDREQKDTYNLTIQAEDSGMP
PLRATKSLVVKVTDENDNPPHFLKPHYQEMVMENNLPGSCLLAVSAEDPDLGMNGTVSYS
IVPGEIKHMDVNTYVSINPSGRIYSMRSFDHEYTRTFDFKVLARDNGNPSLSSNATVRIV
VLDVNDNTPVMTNPPLVNGTAEVSIPRNAGVGFMVTQVKADDYDEGENGRLTYTISEGDR
AFFEIDQVNGEVRSTRMFGENAKSTYEITVVARDHGKPSLSASAYIVVYLSPDLNAQETI
GPVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCRVAEYSYGNQKKSSKKK
KLSKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQSLPLGCRRSESTFLNVENQN
SRNAAPNHGYQHTFTGQGHQQPDLIINGMPLPEIQFGVPLTQGIEAPLYSLSTSLRTHFD
TSDQSPGDTTENYSIDSSYVNSRAHLIKRYVLIRNCYQRLVKIVICNRFYLMSTQLLLHS
CLQVFLFFFPPFSIITGAEEKIWG
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
gtgccgttcctcttgtttctggtggggactgaggccgttataaacctgaaatatggaata
aacgaggagatgaagcccggctcggtgattggaaacgtgacaaaggacgcgctgaagcag
ggatttcagattgcaccgcagcctccctacttgagggttatttccaattccgaaccgcga
tgggtggaactcagcccggctggaatccttacaacgcagatgaaaatagaccgggacgta
gtttgcagacagaacccaaagtgtgttatttccctcgaagtgatgtcaaactctatggaa
atctgtgtcatcaaagttgagattgaggatttaaacgacaacgcgcccagattcccgacc
aaccacattgacatcgagatctcggagaacgcctcccctggaaccaggtttcccctagag
ggggcaagcgatccggactcggggatctttggagtgcagtcatattccatcactcccaac
gagcttttcgggcttgaaataaagacgagaggagacggatctaagatcgcagaacttgtg
gtgcagaaatcgttagacagggagactcagtcacactacacctatgaaatcagcgcagaa
gatggaggagatcctcctaaaataggcgcggtccagttaaacattaaggtgattgattct
aacgacaacaaccccgtgtttgacgaggcggtgtacaccgtgaacgtgatggaaaactcc
cccatcaacaccatagtcatcgacctgaacgcaacagatcccgacgagggcactaatggg
gagattgtgtactccttccacagttacgtcactgaaaaaacgcgagacgcgttcaaaatt
gatccccggacgggaataatcaccgtcaacggcgtcctggattacgaaacggcgcagatc
tacgagatcgacgtccaagccaaagacctgggtccaaactccatcccggcccactgcaaa
gtcacggtgaacgtgatggacacgaacgacaaccctcccgtcatcagcttgctgtccctg
aacacggagatggtggaagtgagtgaaaacgcgcagcgcggatatgtcatcgcgctggtc
agggtgtcagacaaggattccggggccaacgggaaggtgcagtgcaggctgcagggcaac
gttccgttcaggctgcaagagtacgagagtttctccaccatcctcgtagatgggaggctg
gacagggagcagaaggacacctacaacctgaccatccaggcggaggacagcggcatgccg
cctttacgcgcgaccaagtccttggtggtaaaagtcacagacgagaatgacaaccctccc
cacttcctgaaaccgcattaccaggagatggtgatggaaaacaacctccccggttcgtgt
ctgctcgcagtgtcagctgaggacccggacctgggcatgaacggcaccgtctcctactcc
atagtccccggcgagattaagcacatggatgtaaacacatatgtgagcattaatccatcc
ggccgcatttattcaatgagatcgtttgaccacgagtacaccaggacctttgatttcaaa
gttttggccagagacaacggaaacccgtctctgtccagtaacgccacggtgcgcatcgtg
gttctggacgtgaacgacaacacgcccgtcatgacgaacccgcctcttgtcaacggcact
gcggaggtgtccatcccgcggaacgcgggggtgggtttcatggtcacgcaggtgaaggcg
gacgactacgacgagggggagaacggccggctcacctacaccatctccgagggcgacagg
gcctttttcgaaatcgaccaggtgaacggggaggtgcgctccacgcgcatgttcggggaa
aacgccaaatccacctacgagatcacggtggtggcccgagaccacggcaagccctccctc
tccgcctcggcctacatcgtggtgtacctgtccccggacctgaacgcgcaggaaactatc
ggacccgtcaacctgtccctcatcttcatcatcgctctgggctccatcgccgccatcctc
ttcgtcaccatgatctttgtggcggtgaaatgcaaacgggacaacaaggagatccggacg
tacaactgcagggtggcggagtattcctacggcaaccagaagaagtccagcaagaagaag
aagctgagcaagaacgacatccgcctggtgccgcgcgacgtggaggagacggacaagatg
aacgtggtgagctgctcctctctcacctcctcgctcaactacttcgactaccaccagcag
agcctgccgctgggctgcaggcgttctgagagcaccttcctcaacgtggagaaccagaac
tcgcgcaacgccgcgcccaaccacggctatcagcacacgttcaccgggcagggccaccag
cagccagacctcatcatcaacggcatgccgctgcccgagatacagtttggtgtacccctg
acccaaggaattgaagctcctctctactcactttccacttcactccgcactcattttgac
accagcgatcagtcacccggcgacacgacggagaactactccatagactccagttacgtg
aacagcagagcccacctcattaaaaggtatgtcttgattaggaattgttaccagcgtctt
gttaaaattgttatctgtaatcgtttttatctaatgagcacgcagctattgttgcacagc
tgtttgcaagtattcctgttttttttccctcccttcagcataattacaggagcagaggag
aagatttggggataa
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