Tetraodon nigroviridis (spotted green pufferfish): GSTEN00029313G001
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Entry
GSTEN00029313G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K14328
regulator of nonsense transcripts 3
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03013
Nucleocytoplasmic transport
tng03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GSTEN00029313G001
03015 mRNA surveillance pathway
GSTEN00029313G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tng03019
]
GSTEN00029313G001
Messenger RNA biogenesis [BR:
tng03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
GSTEN00029313G001
mRNA cycle factors
P-body specific factors
GSTEN00029313G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Ribosomal_L39
RRM_1
Motif
Other DBs
NCBI-ProteinID:
CAG08354
UniProt:
Q4RTC8
LinkDB
All DBs
Position
1
AA seq
503 aa
AA seq
DB search
MKEDKENTRPKERKLEIKFDDAEKTERMKEKKEAAMTKIVIRRLPPSLTKEELKEQLQPL
PEVDYLEFFSNDTSLFPHLFARAYINFQNQEDIVLFRDRFDGYVFIDKRGQEYPAVVEFA
PFQKTAKKRSKKRDAKCGTINEDPEYKKFLEFYNGDEEKFTSSPEILLEELEAKSKELGA
KKSTPLLDFLKNKQRIREEKREERRRRELERKRLRDEERRKWREEEKKKRKETEKVKKLD
KPLEKERDQGKDEPKIKVCVTHSICLLPCLQCDLLLKKPETSEENESENPKKKAKKPEKL
TKEDRAAGSGDHRRRPNVDHKEDRGRRTEEHGRKEFRERDTDPDRDREKERRQKEKERLK
RRDEERQRRRERLDAENLCRRIEDESKKERERNMDKKRCENLGEFSEKGMKSAKEDRKDE
KRERLRNKSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKISQVQLQEETLEEDQAWPV
STQARGPPRPPTSASVGTFSCWD
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagacaaggaaaacactcgaccgaaggagaggaaattggaaattaagtttgat
gatgccgaaaagacagagaggatgaaggaaaagaaagaggcagcaatgacaaagattgtg
atcaggcgattaccaccaagtttgaccaaagaagagctaaaagaacagctgcagcctctt
ccagaagtggactacttggagtttttctccaacgacaccagcctctttcctcacctcttt
gcgagggcatacatcaacttccaaaaccaagaggatatcgttctcttcagagatcggttt
gatggatacgtgttcatcgacaaaagaggccaagaatatcctgctgttgtggagtttgca
ccatttcaaaagactgccaagaaaagaagtaagaaaagggacgcaaagtgtggaacaata
aatgaagatccggaatataagaagttcttagaattttacaatggagatgaagaaaaattc
acatcatctccagaaatacttttggaagagcttgaggccaaatcaaaggaacttggagca
aagaaatctactcctctgctggacttcctgaagaacaaacagagaatcagggaggaaaag
agggaagagagacgaagaagggagctggaacgcaaacgtctgcgtgatgaggagcgccgt
aagtggagggaggaagagaagaagaagaggaaagagaccgagaaggtgaagaaactggac
aaaccgctggagaaggagagagatcaggggaaagatgagcccaaaattaaggtgtgtgtc
acacacagcatttgtctgctgccctgccttcagtgtgacctactcctgaagaagccagag
accagcgaagagaacgagagtgagaatccgaagaaaaaggcaaagaaaccagagaagctg
acgaaggaggacagagccgcagggagcggcgaccacagacggcgtcccaacgtggaccat
aaggaggatcgaggacggagaaccgaagaacacggacgaaaggagttcagggagcgcgac
acagatccggacagagatcgagagaaggagcgtcggcagaaggagaaggagcgtctcaag
cgtagggacgaagagcggcagaggaggagagaacggctggatgcggaaaacttgtgccgg
aggatcgaggacgagtccaaaaaggaaagagagcgtaacatggacaagaagagatgtgaa
aacctgggagagttctcagagaaggggatgaaatctgccaaagaggacaggaaggacgag
aaaagagagcggctgcgaaacaagtcgtcccacaagactttcaggattaagcgctttctc
gctaagaagcagaaacaaaacaggcccattcctcagtggatccgaatgaagaccggcaac
aagatcagccaggtacaactccaagaggagacactggaggaggaccaagcttggcctgta
agcacacaggcgcgtggccccccacgtccccccacgtcagcatctgtcgggaccttcagc
tgctgggactga
DBGET
integrated database retrieval system
