Tetraodon nigroviridis (spotted green pufferfish): GSTEN00029321G001
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Entry
GSTEN00029321G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K10609
cullin 4
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03420
Nucleotide excision repair
tng04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
GSTEN00029321G001
09124 Replication and repair
03420 Nucleotide excision repair
GSTEN00029321G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tng04121
]
GSTEN00029321G001
03400 DNA repair and recombination proteins [BR:
tng03400
]
GSTEN00029321G001
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tng04147
]
GSTEN00029321G001
Ubiquitin system [BR:
tng04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
GSTEN00029321G001
DNA repair and recombination proteins [BR:
tng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
GSTEN00029321G001
TCR (transcription coupled repair) factors
Cul4-CSA complex
GSTEN00029321G001
Exosome [BR:
tng04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
GSTEN00029321G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
CAG08361
UniProt:
Q4RTC1
LinkDB
All DBs
Position
1
AA seq
894 aa
AA seq
DB search
MKNTRIQQRCRRQLDRVWPLVSKAVFLSSGVGHHANGLAKTAGSATFSNSKPGAAKKLVI
KNFKEKPKLPENYTQETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCSHKISAKLYKQ
LRAVCEDHIKAQIDQFREYPSQFLASGAPRRALPEENRQVLAGPLQANGDVRPPPVTDQF
TARLSQYRSGIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDAKVQSKTIDGI
LLLIGRERSLLRSLLSMLSDLQVAAPLRKLLFFVLQEAALVEASLLSAQIYQESFEQRFL
EETNRLYAAEGQRLMQEREVPEYLHHVSKRLEEEADRVITYLDQSTQKPLIASVEKQLLG
EHLTATLQKGLTHLLDENRIQDLSLLYQLFSRVRSGVQVLLQHWIEYIKAFGSTIVINPE
KDKTMVQELLDFKDKVDYIIDICFVKNDKFVNAMKEAFETFINKRPNKPAELIGGWRRRL
LLASSPAPSSPSNSLLSVPAKHVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFE
AFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVQFKQ
YMQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPPERPRNENCVIANQMVRLQEIFKTFY
LGKHSGRKLQWQSTLGHCVLKAEFKEVDDRLLIPLRVYSLSSVKIILFFFIPFPKKKKKG
KKELQVSLFQTLVLLMFNEGEEFTLEEIKLATGIEDSELRRTLQSLACGKARVLTKLPKS
KDVEDGDKFSCNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMK
MRKTLSHNLLMSEVYNQLKFPVKPADLKKRIESLIDRDYMERDKENSNQYNYVA
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacacaaggatacaacaacggtgtcggcgtcagctggatagagtttggcccctg
gtgagcaaagccgtgttcctgtcctccggcgtggggcaccatgccaacggactggccaag
acggcgggctccgccaccttctccaacagtaaacccggtgctgccaaaaaactagtcatc
aagaacttcaaagaaaaacccaagttgcccgagaactacacgcaggagacctggcagaag
ctgaaggaggcggtggaggccatccagaacagcacatccatcaagtacaacctggaggag
ctctaccaggctgtggagaacctctgctcccacaagatctccgccaagctttacaagcag
ctgagggccgtgtgcgaagaccacatcaaggcccagatcgaccagttcagagaatatcct
tcacagtttctggcttcgggcgctcctcggcgtgctcttcctgaagaaaatcgacaagtg
ctggcaggaccactgcaggcaaatggtgacgttcgccctcctccagttaccgaccagttt
accgctcgtttatcacagtacagatcagggatcatgatccggagtatttttttgtttttg
gaccgcacctacgttttacagaactcgatgctgccgtcgatctgggacatgggcctggag
ctcttcaggttctacatcatcagcgacgccaaggtccagagtaaaaccatcgatggcatc
ctcctgctgatcggccgggagcggagcctcctccggagcctgctgagcatgctgtccgac
ctgcaggtagccgctccgttgcgcaaacttttattttttgttcttcaggaagcggctttg
gttgaagcctctcttctctccgcgcagatctatcaggagtcatttgagcaacgctttttg
gaggaaaccaaccgtctgtacgcggcggagggccagaggctgatgcaggagagagaggtc
ccggagtacctccatcacgtcagcaagcggctggaggaggaggcggacagggtcatcacc
tacctcgaccagagcacgcagaaacctctgatcgccagcgtagagaagcagctgctgggc
gaacatctcacggctactctgcagaaaggtttgacccacctcctggacgagaaccggata
caggacctctcgcttctctaccagctcttcagccgggtgaggagcggcgttcaggtgctg
ctgcaacactggatagaatatataaaggcttttggaagcaccatcgtcatcaacccggaa
aaggacaaaacgatggtgcaggagttgttggattttaaagacaaggtggattacatcatc
gacatctgcttcgtcaagaacgacaagttcgtcaacgccatgaaggaggccttcgagacc
ttcatcaacaaacggcccaacaagccggcggagctcataggtggctggcgccgccgtctc
cttcttgcttcttctccggctccttcttctccttctaactctttgctttcggttccagcc
aaacacgtggattccaagctgagagctggaaacaaggaggccacagacgaggagctggag
aaaatgctggataagatcatgattatctttagattcatttatggaaaagatgttttcgag
gccttttacaagaaggatctggccaagaggctgcttgttggcaaaagcgcctcggtggac
gccgagaaatcgatgctatcgaagctgaagcacgagtgtggagccgcattcaccagcaaa
ctggagggcatgtttaaggacatggagctctccaaagacatcatggtgcagttcaaacag
tacatgcagtgccaaaacatccccggcaacattgagctgacggtgaacatcctcacgatg
ggatactggccaacatacgtccccatggaagtacacctgccccctgagcgcccgcgcaat
gaaaactgtgttatcgccaaccagatggtgcgactgcaggagatcttcaagaccttctac
ctgggcaaacacagcggcaggaagcttcagtggcagtccacactcggccactgcgttctg
aaagccgagtttaaggaggtagacgaccggctcctgattccgctgcgtgtttactctcta
agttcagtaaaaattattctttttttttttattccttttccaaaaaaaaaaaaaaagggc
aaaaaggagctgcaggtgtcgctcttccagacgctggtgctgctgatgtttaacgaaggg
gaggagttcaccctggaggagatcaaactggcaaccgggatcgaggacagcgaactgcgc
cgaactctccagtctctggcctgcgggaaagcgcgcgtgctcaccaaacttccaaagagc
aaagacgtggaagacggggacaagttttcctgcaacgacgacttcaaacacaagcttttc
cggatcaaaatcaaccagatccagatgaaagaaacggtggaggagcaagcgagcaccacg
gagcgagtcttccaggaccgccagtatcagatcgacgccgccatcgtgcgaatcatgaag
atgaggaagaccctgagccataatcttttgatgtctgaagtgtacaaccagctcaagttc
cctgtcaagcctgctgacctgaagaagagaatagagtctctaattgacagagactacatg
gagcgtgacaaagagaactccaaccagtacaactatgtggct
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