Tetraodon nigroviridis (spotted green pufferfish): GSTEN00029420G001
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Entry
GSTEN00029420G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03022
Basal transcription factors
tng03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GSTEN00029420G001
09124 Replication and repair
03420 Nucleotide excision repair
GSTEN00029420G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tng03021
]
GSTEN00029420G001
03400 DNA repair and recombination proteins [BR:
tng03400
]
GSTEN00029420G001
Transcription machinery [BR:
tng03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
GSTEN00029420G001
DNA repair and recombination proteins [BR:
tng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
GSTEN00029420G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-ProteinID:
CAG08435
UniProt:
Q4RT47
LinkDB
All DBs
Position
12
AA seq
299 aa
AA seq
DB search
MASEDEISLLVIVVDVNPIWWGQQAQRQPEFTLSKCLDAMMVLGNSHMAMARTNKLAVIA
SHCQDSHFLYPSNKLQVGDGNGDENTSSSGDGKYELLSVANNLIVEEIRSVMLKTEVRGN
SNDTLLAGSLAKALCYINRVSKELEVGQETKSRILVIKAAEDSALQYMNFMNVIFAAQKQ
NILIDACVLDSDSGLLQQACDITGGLYLKIPQKLALAQYLLWVFLPDTEQRSQLLLPPRA
HVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKIQLPQMVKPKKKKPKM
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagaagatgaaatcagtctactggtaattgtcgtagatgtaaatccgatatgg
tggggacagcaagctcaacgccagccagagttcacactttccaagtgcctggatgcgatg
atggtgttgggaaactcgcatatggcaatggccaggacaaataaactagctgtcattgcc
agccactgtcaggacagtcacttcttgtatccaagtaataagctgcaagttggggatgga
aacggagatgaaaatacatcttccagcggagatggaaaatacgagctcctgtctgtcgcc
aataatctaattgttgaagagatacggagtgttatgctaaaaactgaagtcagggggaat
tccaacgatactttgttggctggatctctggccaaggctctctgttatattaacagggtc
tcaaaagagttggaagttggacaggagacaaaatcaagaatactggtaataaaagctgca
gaggacagtgctctccagtatatgaacttcatgaacgttattttcgctgcccagaagcag
aacatcctgatagatgcgtgtgtgttggattcggactcaggtcttcttcagcaggcctgt
gatattactggaggactgtacctcaagataccccagaaattggccctggcccagtacctc
ctgtgggtgttcctgcctgacaccgagcagcgttcacagctgctgctgcccccacgcgcg
cacgtggactacagagccgcctgtttctgccatcggaacctcattgaaattggatacgtg
tgctcagtttgtctatcaatcttctgcaacttcagccccatctgcaccacatgcgagaca
gccttcaaaatccagctacctcagatggtcaaacccaaaaagaagaaacccaaaatgtaa
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integrated database retrieval system
