KEGG   Tetraodon nigroviridis (spotted green pufferfish): GSTEN00029542G001
Entry
GSTEN00029542G001 CDS       T04346                                 
Name
(GenBank) unnamed protein product
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
tng  Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03030  DNA replication
tng03410  Base excision repair
tng03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tng00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GSTEN00029542G001
   03410 Base excision repair
    GSTEN00029542G001
   03420 Nucleotide excision repair
    GSTEN00029542G001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tng03032]
    GSTEN00029542G001
   03400 DNA repair and recombination proteins [BR:tng03400]
    GSTEN00029542G001
Enzymes [BR:tng01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     GSTEN00029542G001
DNA replication proteins [BR:tng03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    GSTEN00029542G001
DNA repair and recombination proteins [BR:tng03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      GSTEN00029542G001
SSDB
Motif
Pfam: DUF1744 POL2_thumb zf_DPOE_2 DNA_pol_B_exo1 DNA_pol_B APP_N
Other DBs
NCBI-ProteinID: CAG08538
UniProt: Q4RSU4
LinkDB
Position
12
AA seq 1768 aa
MISAVDYYFIQEDGSRFKNCEREVSSYVSKKFQGKVAKLDIVPKEDLDLPNHLVGLKRSY
IKLSFNTVDDLIKVKREITPAVRKNREREQSNDAYTSMLSSALSGGHVTSADDEGMLKNI
SDQLHNIVDMREYDVPYHVRLSIDLKIHVAHWYNVRYRGSAYPPEIVRRDDLVERPDPVV
LAFDIETTKLPLKFPDAETDQIMMISYMIDGQGFLITNREIVSENIEDFEFTPKPEYEGP
FTVFNEDDERFPLFMCIDHLSDIFLHGRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDP
EEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLC
EALLMVQAFHANIIFPNKQEQVFNKLTDDGHVLDSETYVGGHVEALESGVFRSDIPCRFK
MNPAAFDFLLQRVEKTMRHAIEEEEKIPLHQVTNFNEVCWLPVWSLSPQRFQLNVVERLW
RFFQVCDEIKTKLTSLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAAC
DFNKPGAACQRRMTWQWRGEIMPASRSEFHRIQQQLESEKFPPFFPNGPPRAFHTLSKEE
QAKHEKKRLADYCKKAYKKTHVTKLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKV
WKKKLSGAQESGDAAEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGI
VCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVVKTSNEKKPKVTVSYPG
AMLNIMVKEGFTNEQYHELVEPASLTYNVKSENSIFFEVDGPYLAMILPASKEEGKKLKK
RYAVFNEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVAKVADYWL
DVLYSKAANMPDAELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGL
SCRYVISRKPEGSPVTERAIPLAIFQAEPSVKKHFLRKWLKMPSLHDLDIRSILDWSYYI
ERLGSAIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKINELFTSEGKRQ
VSHQPLEAGQVADMEDFGMPARPLQPAILISTKRKRSSQGGDSQVESQDVELTQSWREIL
GPPPPVGKTRVNRMLPRSNIVYYLYEYCVPEDMYQEHINEINADLSAPDIEGVYETQLGC
VCMVNKHVVRDLAGREADTFDLEHLEMRSLAQFSYLEPGSVRHMYLYHHSQGHKALFGLF
IPSQRKASIFILDTVRSNQMPNLSNLYSAERTALLDKTTEELLPPEKHNFEVRAESDIKA
IYRALQRILLNYKEERRGPTLIAMQSNWELKRVAAGMPVLEEFPVVPVHVVDEISYNVLD
WQRLGARRMIRHYLNLDSCLSQAFDMARYYHLPVGNLPQDVSIFGSDLFLARHLRKHNHL
LWLSPTSRPDLGGKEADDSRLVMDSDDKGSVEINAQGCYSTGTQNRDGGEIRPMLLYFGK
QRLILKSMVVGWVREITQFHNVYADNQVMHFYRWLRSPSSLLHDPALHRTLHNMMKKVFL
QLISEFKRLGSTVVYGNFNRIILCTKKRRIDDAIGYVEYITNSIHSKEIFHSLSISFSRC
WEFLLWMDPANYGGVKGKLPSSVLYGEVLSLDANIINQMNKLKRDLLRLVDVGEFSDEAQ
FHDPCNSYILPEVICHHCNFCRDLDLCKDPSVAQDGSVLPQWFCSNCQAQYETSTIEMAL
VEALQKKLMSYTLQDLVRTNLKSFLFTY
NT seq 5307 nt   +upstreamnt  +downstreamnt
atgatcagtgctgtggattattatttcatccaggaggatggaagcaggtttaagaactgt
gagagagaagtgagctcatatgtgtcaaagaagttccaaggaaaagtggcaaagctggac
attgtgccaaaagaggatttggacctgccgaaccatctggttggactgaagagaagctac
atcaagctgtcgttcaacactgtggatgaccttatcaaggttaagcgcgagatcaccccg
gctgtgcgcaagaacagggagcgggagcagtccaatgacgcttacacctcaatgttatca
agtgccttgtcaggtggacatgtgacctcagcagatgatgaggggatgctcaaaaacatc
tcagatcagttacacaacatagtggatatgagggagtatgacgttccctatcacgtccga
ttgtccatcgacctcaagatccatgtggctcactggtacaatgttcggtacagaggcagc
gcttatccaccagaaattgtccggagagatgatctggtggagagaccggaccctgtcgtg
ctggctttcgacatcgagaccaccaaactccctctgaaatttccagatgcagagactgac
cagattatgatgatctcttacatgatcgatgggcaggggtttctaatcacaaaccgagag
atcgtctctgagaacattgaagactttgaattcactccaaaaccagaatatgaaggccct
ttcactgttttcaatgaggatgacgagaggttcccactcttcatgtgcattgatcatctt
tctgacatattcctgcatggcaggtgggtaaagagagacagctacctgccggtgggaagc
cataatctgaaagcagcagccaaggccaagctgggctacgacccagtggagctggaccca
gaggagatgtgtcgcatggcaaccgaggagccacagactttagccacctattctgtgtct
gatgctgtggccacatattacctgtacatgaagtatgttcatcccttcatctttgctctg
tgcaccatcatcccgatggaaccagatgaggtgcttcgtaaaggttctgggactctgtgt
gaggctttgctcatggtgcaggctttccacgcaaacatcattttccccaacaaacaggag
caggtcttcaataaactgacagatgacggccacgtcctggactccgagacctacgtgggc
ggccacgtggaagcgctggagtcaggagtgttccgcagtgacatcccctgccgtttcaag
atgaacccagctgcttttgacttcctcttgcaaagagttgagaaaactatgcgtcacgcc
atcgaggaagaggagaaaattcccttacatcaagtcaccaacttcaatgaggtttgttgg
cttcctgtttggtccttgtccccccagcgtttccagctgaacgttgtagaacgtctgtgg
cgtttctttcaggtttgcgacgagatcaaaaccaagctgacttctctgaaagaggttcca
aacaggattgaatgtcctctcatttaccatctggatgtcggggcaatgtacccgaatatc
atcctcaccaaccgcctgcagccctccgctatggttgatgaggccacttgtgctgcctgt
gacttcaacaagcccggcgccgcatgtcagaggaggatgacctggcagtggagaggcgaa
atcatgcctgccagccgcagcgagtttcatcgcatccagcagcaactcgagtctgagaaa
ttcccgccgtttttcccaaacggcccaccgagggcgtttcacacgctcagcaaagaagag
caggccaaacatgagaagaaacggctggcagattactgtaaaaaggcctataagaagacc
catgtcaccaagctggaggagcgagtcaccaccatctgccagagggaaaactccttctac
gtcgataccgtaagagctttccgagatcggcgttatgagttcaaaggactacacaaggtg
tggaagaaaaaactttcaggtgctcaggagagcggagacgcagctgaagtgaagcgctgc
aaaaatatggagatcctgtacgactcgcttcagctggctcacaagtgtattctcaactct
ttctacggctacgtcatgaggaaaggggctcgctggtactccatggagatggccggcatc
gtgtgcttcacgggagcaaacatcatcactcaggcccgagagctgatcgaacagataggg
aggccactggagctggacacagatgggatctggtgtgtgctccccaacacgttccctgag
aactttgtggtgaagaccagcaacgagaagaagcccaaggtgaccgtgtcttaccctgga
gccatgctgaacatcatggtgaaggagggattcaccaacgagcagtaccacgagctggtc
gagcccgcctctctcacgtacaacgtcaagtcggagaacagcatcttcttcgaagtggac
ggaccgtacctggccatgatcctgcccgcttcaaaagaagagggaaagaagctgaagaaa
aggtatgctgtgttcaacgaggatggatctctggctgagctgaagggatttgaagtgaaa
agaagaggagagctccagcttattaagatttttcagtcatcagtgtttgaggcttttctc
aaaggcaccactctggaagaggtgtacgcctccgtggccaaagtagctgattactggctg
gacgtactgtacagcaaggctgccaacatgccagatgcagagctttttgagctgatttcg
gagaaccgatcgatgtccagaaagctggaggattacggagaacagaaatccacttcgatc
agcacggctaagagactggcagagttcctgggagaccagatggtcaaagatgccggactg
agctgtcgctatgtgatctccagaaaacccgagggttcacctgtcacagaaagggccatt
cctctggccatcttccaggctgagcccagtgtgaagaagcacttcctccggaagtggctg
aagatgcccagcctgcatgatttagacatccgctctattcttgactggagttattacatt
gaaaggttgggaagcgccattcagaaaatcattaccatccctgcagctcttcaacaggtg
aagaatccagtacccagagtgagacatcccgactggcttcataagaaacttctggagaaa
aacgacatttataagcaaaagaaaatcaacgagctgttcaccagcgagggcaaacgacag
gtgtcccatcaaccccttgaagctggccaggttgcagacatggaagacttcggaatgcca
gccagacctctgcagccagccatcttaatcagcaccaagcgcaaacgctcgtctcagggg
ggtgacagccaggtggaatctcaggatgtggagctcactcagtcctggagagagatcctg
ggcccacctccaccagtggggaagacacgagtgaatcgcatgctgcctcgctccaacatt
gtctactacctttatgagtactgtgtacctgaggacatgtaccaagaacacatcaacgag
atcaatgctgatctctccgctccagatattgagggcgtctacgaaacacagctcggctgc
gtgtgtatggtgaacaaacacgtggttcgggatctggcaggcagggaggctgacaccttt
gacctggagcatctggagatgaggtctctcgcccagttcagctacctggaaccaggaagc
gttcgacacatgtacctgtatcatcacagtcagggacacaaagctttgtttggtttgttt
attccatctcagcgcaaggccagcatcttcatcttggacacagtcagaagtaaccagatg
cccaacttgagtaacctctactcagccgagcgcaccgctctgctggacaagaccacggag
gagcttctgcccccagaaaaacacaacttcgaggtccgcgcagagagtgacataaaggcc
atttaccgcgctctccaacgcatactgctgaactacaaggaggagcgtcgtgggcccacc
ctcattgcgatgcagtcaaactgggagttgaagcgggtggcagcgggcatgcctgtcctc
gaggagttcccagtggtaccagtgcatgtagtagatgagatcagctataatgtactggac
tggcagcgcctgggggcccggcggatgattcgacactacctcaacctggacagctgcctt
tcacaggcttttgacatggccaggtattaccacttaccggttgggaacctgcctcaggat
gtgtccatctttggttctgatttgttcctggcgaggcatttacggaaacacaaccacctg
ctgtggctttcgcccacatccaggcccgacctgggagggaaagaagcagatgacagtcgc
cttgtcatggacagtgatgacaagggatctgtggagatcaacgctcaggggtgttactcc
acaggtacccaaaaccgagacggaggagaaatcagaccgatgcttctgtattttgggaag
cagcgtttaatcttgaaaagcatggtggttgggtgggtcagagagattacccagttccac
aacgtatacgcagacaaccaggtgatgcacttctaccgctggctgcgctctcccagctct
ctgctccatgaccctgccctgcaccgcaccctgcacaacatgatgaagaaggtgtttctg
cagttgatttcggagttcaagcgtcttggctccaccgtggtctacggaaacttcaacagg
atcattttatgcactaagaaacggagaatcgatgatgccattggctacgtagagtacatc
accaacagcatccattccaaggaaatctttcactctctgtccatctcattctcccgatgc
tgggagttcctgctgtggatggatccagccaactatggcggagtgaagggcaaacttcca
tccagcgtcctgtacggagaggttctttctctggatgccaatataataaaccagatgaac
aaactgaaaagggacctcctgcgcctcgtggatgtgggagagttttctgatgaggctcag
ttccatgacccttgtaactcctacatcctaccagaggtcatctgccaccactgcaacttc
tgccgtgacctggacctctgcaaggacccgtctgtagcacaggatggttctgtgttgcct
cagtggttctgttccaactgtcaggcacaatatgagaccagtaccattgagatggcactg
gtggaggctctgcagaagaagctaatgagctacaccctgcaggacctggtgaggacaaat
ttaaaatcatttttattcacatactga

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