Tetraodon nigroviridis (spotted green pufferfish): GSTEN00029566G001
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Entry
GSTEN00029566G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K13103
tuftelin-interacting protein 11
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tng03041
]
GSTEN00029566G001
Spliceosome [BR:
tng03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
GSTEN00029566G001
Other components
Complex C specific factors
GSTEN00029566G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Orbi_VP5
Motif
Other DBs
NCBI-ProteinID:
CAG08558
UniProt:
Q4RSS4
LinkDB
All DBs
Position
12
AA seq
862 aa
AA seq
DB search
MSMSHLYGRRGGEEEEEGVEVESFEVTDWDLANEFNPDRRRYRQTKEQATYGIWAERDSD
EAEKQSFGGKESKDYTAPVNFVSAGLRKTAAEEDQQKEEEGSDDSDDSGPSAPPTSRGIA
PKKLQMGNFGGNQYQRFAGGIQMGKGLGSWEKHTKGIGQKLLQKMGYQAGKGLGKNAQGI
VNPIEAKVRKGKGAVGAYGNERTQQSLQDFPVVDSEEEEEKEFKKELGQWRKDPAGSGVT
KMPKYSYKTVDELKAKGKLTARSTAASAGELAQVKVIDMTGREQKVYYSYSQMSNKHSVP
HEGVPSLTARDQKGSGFALPELEHNLQLLIDLTEQDILQSARRLQHEKDIVVSLTHESKA
LQSRLETEQNAIQRMEAVQALVDRFPSGEMAPGEGPTLQECARIFETLQSDYYEEYKTLG
LGDLAVPVVYPLLKEKLRSWDPLKDPSYCLEDIGQWRAILESRDLHSSGPDSNMDPYHRL
LWEVWIPVMRSYVSCWQPRMVGPMVDCVEVWAPLLPRWITDYLLEQLLLPRLQREVDNWN
PLTDTVPIHSWIHPWLPLLQSRLEPLYPPIRSKLSNALQRWHPSDTSARLILQPWKDVFT
PGAWEAFMVKNIIPKLALCLEELVINPQQQQMEPFNWVMDWEGMLSPSSLVSLLDKNFFP
KWLQVLCSWLSNSPNYEEITKWYLGWKSMFSDLMLSQLVIKEKFNEALDIMNRAVSSGMG
GYMQPGARENIAYLTQTERRKDFQYEAMQERRDSESVAQRGVGPTLPTNFKDLIQAKAEE
NNIVFMPVVARRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPIVFAESDRYGQIRGNCL
HFYVTFHDSVCLCISVSVTTGV
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgtctcatctgtacgggcggcgaggtggtgaggaggaggaggaaggtgtcgag
gtggaaagcttcgaggtgacagactgggacctcgccaacgagtttaacccagaccgccgc
agatacaggcagaccaaggagcaagctacctacggcatttgggctgagcgggactcggat
gaggctgaaaagcagagttttggaggcaaagagtcaaaagactacactgcaccggtgaac
tttgtcagtgctggcctgcgtaaaactgcagctgaggaggaccagcaaaaagaagaagaa
ggctcagatgactctgatgatagtggtccttctgcacctcccacttctcgtggcattgcc
cccaaaaaacttcagatgggtaattttggagggaaccagtaccagaggtttgcaggtggc
atacagatgggtaaaggtttaggtagctgggagaagcatacaaaagggattggccaaaaa
ctgctgcagaaaatgggataccaagcaggcaaaggcctgggcaagaatgctcaaggcatt
gtaaaccccattgaggcaaaagtccgtaaaggtaagggagctgtgggggcttacggcaac
gagcgaactcagcagagtcttcaggattttcctgtagtcgactcagaggaagaggaagaa
aaggaatttaaaaaggagttgggtcagtggcgtaaggatcctgcgggctctggggtgacg
aagatgcccaagtattcttacaaaaccgtggatgaactaaaggctaaaggaaaattgaca
gcacgcagtacagcagcatccgcaggggagttggcgcaggtcaaggtgattgatatgact
ggaagagagcaaaaagtgtactacagttacagccagatgtccaacaaacacagcgttcca
cacgaaggtgtgccgagtctgaccgctcgggatcagaagggatctggctttgccctccct
gagctggagcataatctgcagcttctgatagatctcacagagcaggacatattacagtct
gccaggcgcctgcagcatgagaaagacatcgttgtctctctgacccatgaatcaaaagct
ctgcagagcagactggagaccgagcaaaatgcaatccagaggatggaggctgtacaggca
ctggtggatcgttttccttctggggagatggcaccaggggagggacctaccctgcaggag
tgtgcaagaatttttgagactttacaatcggactattacgaagaatacaagacattgggc
ctgggggatctggctgtacctgttgtttacccattactgaaagaaaaacttcggtcttgg
gatcccctgaaggacccctcttattgtctggaagacattggacagtggagggcaattctt
gaatccagagaccttcactctagtgggccagactcaaacatggatccttaccacagactt
ctgtgggaagtttggatcccagtgatgcggtcgtatgtgtcatgctggcagccccgtatg
gtgggacccatggtggactgtgtggaggtatgggctccgctcctcccccgctggatcact
gactacctgttggagcagcttcttttaccacgtcttcagagagaggtggataactggaac
cctttaactgacacggtgcccatccactcctggatccacccttggctgcctctgcttcag
tctcgtctagaaccactttatccacccatcaggagcaagctctccaatgctctgcagagg
tggcaccccagcgacacttcagcccgcctcattttgcagccatggaaagacgttttcact
ccaggggcatgggaggccttcatggtgaaaaacatcatccccaaactagctctgtgtttg
gaggaactagtcattaaccctcagcagcagcagatggagccatttaactgggtgatggac
tgggagggaatgctgtccccctccagcctcgtgtctctgctggacaaaaacttctttcca
aagtggttacaggtcctgtgttcgtggttgagtaacagtcctaactatgaagaaatcacc
aaatggtacttgggctggaaaagtatgttcagtgatctcatgctttcacaactggttatc
aaggaaaagtttaatgaagctttggacatcatgaaccgtgcagtgtcttctggcatgggt
ggatatatgcaacctggtgcaagggagaatatcgcatatctaacacagacagaaagacga
aaagactttcaatatgaggcgatgcaggaacgacgagattctgagagtgtggcccagaga
ggagtcggccccactttaccaactaacttcaaggatcttatccaggccaaggcagaggag
aacaacattgtctttatgcctgtagtggccagacggcatgagggtaaacagttgtacaca
ttcgggcgcattgtcatttatatcgacagaggggttgtgtttgtgcaaggtgagaaaacc
tgggtgcccatcgtctttgcagagtctgatagatatggccaaataagggggaactgttta
catttctatgtaacttttcatgattccgtctgtctttgtatatctgttagtgttaccacg
ggtgtgtaa
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