Tetraodon nigroviridis (spotted green pufferfish): GSTEN00029998G001
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Entry
GSTEN00029998G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K07466
replication factor A1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03030
DNA replication
tng03420
Nucleotide excision repair
tng03430
Mismatch repair
tng03440
Homologous recombination
tng03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GSTEN00029998G001
03420 Nucleotide excision repair
GSTEN00029998G001
03430 Mismatch repair
GSTEN00029998G001
03440 Homologous recombination
GSTEN00029998G001
03460 Fanconi anemia pathway
GSTEN00029998G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tng03000
]
GSTEN00029998G001
03032 DNA replication proteins [BR:
tng03032
]
GSTEN00029998G001
03400 DNA repair and recombination proteins [BR:
tng03400
]
GSTEN00029998G001
Transcription factors [BR:
tng03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
GSTEN00029998G001
DNA replication proteins [BR:
tng03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
GSTEN00029998G001
DNA repair and recombination proteins [BR:
tng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
GSTEN00029998G001
MMR (mismatch excision repair)
GSTEN00029998G001
DSBR (double strand breaks repair)
HR (homologous recombination)
GSTEN00029998G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
Rep-A_N
DUF223
RADX
Motif
Other DBs
NCBI-ProteinID:
CAG08885
UniProt:
Q4RRU7
LinkDB
All DBs
Position
7
AA seq
631 aa
AA seq
DB search
ISTGSGTSRYRLKMSDGRYFWSCKHLKLSASTFVWIQRMPVPYFIFVFQRCAQQQQFVCM
FYRAAFLLATQLNSLPEKNLLVPHCVCVLKRTTSNTLSDGRRVIVVLDMEILQSAEESGG
LIGNPAAFKDGMASPSTFSPAKASPSTFSPTKASPSTFSPAKASPSTFSPTKASPSTFSP
AKASPSKVSPKKASSSSPGPSTNLISIAQLNPYLSKWTIRARVMNKASIRNWSNSRGEGK
LFSFVVVDESGEIKITVFNNEVDKFFPLVEQGKVYYISKATLKVANKQYNTLNHDYEMTL
HAHSSIVPCADGQDIPAAQCDFVPIAELENRDKDAIIDVIGVCKTVEDVSRITTRTSREV
SKRTLHLIDTTGKMVAATLWGEEAEKFDGSEQPVVAIKGARLSDFGGRSLSTLFSSTVMV
NPDIPEAIRLRAWYDHGGYAQDSQSLSETKSRGSGARMNWKTLSEVKNENFGTRRKDYFS
CVATLLYIRKDSCLYRACPSSDCNKKVIDQFNGWFRCEKCNQDFPNFEYRLLLSANLADF
GDNQWVTCFQETAEVLLGHSAETLGRLRDTDEAAFDAVFQKANFTSYIFKIRVKLETYND
ESRVKATVMEVQPLDHREYSRRLLGNIRKLA
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atctccactggctctggaacatccagataccgtctcaaaatgagtgacggacgctacttt
tggtcatgtaagcatctcaaactctcagcatcgacgttcgtttggattcagagaatgcct
gtgccttatttcatttttgttttccaaagatgtgcacagcaacaacagtttgtgtgtatg
ttttatcgtgcagccttcctgcttgccacacaattaaacagtcttccagagaaaaacctg
ttggttccgcactgtgtgtgtgtgctcaaaagaactacaagcaacacgttgtcagatggc
aggcgtgtaattgtcgtgttggacatggaaatattgcagtcggccgaggaaagtggaggg
ttgattggaaatcccgccgcatttaaagacggtatggcttccccatccacattttcccct
gcaaaggcttccccatccacattttcccctacaaaggcttccccatccacattttcccct
gcaaaggcttccccatccacattttcccctacaaaggcttccccatccacattttcccct
gcaaaggcttccccatccaaggtttctccaaagaaggcctccagcagttcaccaggtcct
tcaacaaacctgatttctatcgctcagctcaacccttacctaagcaaatggaccatcaga
gccagagtcatgaacaaggccagtatccgcaactggagcaactccagaggagaaggaaag
ctcttctcctttgtggtagtagatgaaagcggtgaaataaagattacagtcttcaacaac
gaagtggataagttcttccctttagtggagcaaggaaaggtttactacatctccaaggct
actctgaaagtggccaacaagcaatacaacactttaaatcacgactatgagatgaccctc
cacgctcattcctccattgtgccgtgtgctgacggtcaggacatcccagcagcgcagtgt
gactttgtgccaatcgccgagcttgaaaacagagacaaggacgccatcattgatgtgatc
ggagtgtgtaaaactgtggaggatgtttcccgcattaccactaggactagcagagaagtt
tccaagagaactcttcacctaatagacaccactggaaagatggtggcggccacactgtgg
ggagaggaggcggagaaatttgacggctccgaacagcctgtggtcgccatcaaaggagct
cgcttgtctgattttggaggcagatctctctcgactttgttcagttcaacagtcatggtc
aatccagacataccagaggcgatcagactaagggcctggtatgatcatggaggctatgca
caggacagccagtctctgagtgaaacaaagtcgaggggaagcggagcaaggatgaactgg
aaaacactgagcgaagtcaaaaatgaaaattttgggacacggagaaaagattactttagc
tgtgtagcgacgctgctgtacatcaggaaggacagttgtctgtaccgagcatgtccgtct
tcagactgcaacaagaaggtcatagatcagttcaatgggtggttccgctgcgaaaagtgt
aaccaagacttccccaactttgaatacagactgctgctttctgccaacttggctgacttt
ggggataaccagtgggtgacgtgcttccaggagacagccgaggtcctgctgggtcacagt
gctgaaaccctgggacggctcagagacacggatgaggcagcatttgacgcagtcttccaa
aaagccaacttcacatcttacatctttaaaatcagagtcaagctggagacctacaacgat
gagagtcgggtgaaggcaacagtgatggaggtccagccgctggaccacagagagtacagc
aggaggctcctcggcaacatccgcaaactggcc
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integrated database retrieval system
