Tetraodon nigroviridis (spotted green pufferfish): GSTEN00030170G001
Help
Entry
GSTEN00030170G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K08775
breast cancer 2 susceptibility protein
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03440
Homologous recombination
tng03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GSTEN00030170G001
03460 Fanconi anemia pathway
GSTEN00030170G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tng04121
]
GSTEN00030170G001
03036 Chromosome and associated proteins [BR:
tng03036
]
GSTEN00030170G001
03400 DNA repair and recombination proteins [BR:
tng03400
]
GSTEN00030170G001
Ubiquitin system [BR:
tng04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
GSTEN00030170G001
Chromosome and associated proteins [BR:
tng03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
GSTEN00030170G001
DNA repair and recombination proteins [BR:
tng03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
GSTEN00030170G001
FA (Fanconi anemia) pathway
Downstream FA components
GSTEN00030170G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
Tower
Sf6_terminase
Motif
Other DBs
NCBI-ProteinID:
CAG09009
UniProt:
Q4RRH3
LinkDB
All DBs
Position
16
AA seq
704 aa
AA seq
DB search
DLFQHLHNVELARDMQGMRIRKKKRQTILPLPGSLFLKKSSGVTRIPLKSAVNGKPPALL
TSFVVFQLYGLGVPLNVLEITSETAGSFRFSLQQFVKLESLTDKGGIQLADGGWLIPRND
GTAGKEEFYRALCDTTGVDPKLISEEWVYNHYRWIVWKQASMERSFPEQLGSLCLTPEQV
LLQLKYRYDIEVDQSRRPALRKIMERDDTAAKTLILCVCGVVSRGSSPQKQGLGGVAAPS
SDPQVENPFAVVWLTDGWYSIKAQLDGPLTSMLNRGRLPVGGKLIIHGAQLVGSQDACSP
LEAPESIMLKIFANSSRRARWDAKLGFYRDPRPFLLPVSSLYNSGGPVGCVDIIILRSYP
TLWMERKPEGGTVFRSGRAEEKEARRYNVHKEKAMEILFDKIQAEFEKEERDNRKPRSRR
RTIGDQDIKSLQDGEELYEAVGDDPAYLEAHLTEQQAETLQNYKRLLIEKKQAELQDRYR
RAVETAEDGTGSCPKRDVAPVWRLSIADFMEKPGSVYQLNIWRPPSELQSLLKEGCRYKV
YNLTTTDSKKQGGNTTVQLSGTKKTQFEDLQASEELLSTYFQPRVSATFIDLQDPEFHSL
CGEVDLTGYVISIIDGQGFSPAFYLTDGKQNFVKVRCFSSFAQSGLEDVIKPSVLLALSN
LQLRGQATSPTPVLYAGDLTVFSTNPKEVHLQESFSQLKTLVQV
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
gacctttttcagcatcttcacaacgttgagctggctcgggatatgcagggcatgcgaatc
aggaaaaagaaacgccagaccattcttccattaccgggaagtttgtttctgaaaaaatcc
tccggagtgaccaggattccacttaagtctgcagtgaacggaaaaccccctgcactttta
acatcctttgtggtttttcagctgtatggcctcggggttcctctgaatgtgttggagatc
accagtgagactgcaggatcttttcgcttcagtttacagcagtttgttaaactggagtct
ctcacagataaaggcggcatacagctggcggatggaggatggttgattcccaggaatgat
gggacagcaggaaaagaagagttttatcgagcattatgtgataccacgggggttgatcct
aaactaataagtgaggagtgggtgtataatcactaccgatggattgtgtggaaacaagct
tccatggagagatcatttccagaacagctgggcagcctctgtctcacgcctgagcaggtt
ctcctccaacttaagtacagatatgacatagaggtggaccagagtcgcaggccagctctc
agaaaaataatggaaagggatgacacagcagctaaaaccctgatcctgtgtgtttgtgga
gttgtctcaagaggcagctccccacaaaaacagggtctggggggcgtcgctgctccaagt
tctgacccacaggtggaaaatccctttgcggtggtttggctgactgatggatggtattcc
attaaggcgcagctggatggacctttgacctccatgcttaacaggggtcgactgccagtt
ggcgggaagctgattattcatggtgctcagctagtcggttcacaggatgcttgttctcct
ttggaggcccctgagtctatcatgctaaagatttttgccaacagcagcaggcgagcacga
tgggatgctaaactgggattttatagggacccacggccattcctgctccctgtctcttct
ttgtacaacagtgggggacctgtaggatgtgtggatattattatattaagaagctatccc
acattatggatggagagaaaaccagaaggaggcactgtgttccggtcaggccgagcagaa
gaaaaggaggctagacggtacaacgtccacaaggaaaaagctatggagattctgtttgac
aagattcaagcggaatttgaaaaggaagagagggataacaggaaacctcggagcagaaga
cggacaatcggtgatcaagatatcaaaagtcttcaagatggagaggagctgtacgaagca
gtgggcgatgacccagcttaccttgaggcacatttgactgagcagcaggcagagactcta
cagaactacaaacgtctgctgatagaaaagaagcaagcagagctgcaggatcgctaccgg
cgagctgtagaaactgcagaggatggcacaggcagctgtcccaagcgagatgtagcacct
gtatggagactcagcattgctgacttcatggaaaagccaggcagtgtttaccagctgaac
atttggcggcctccctcagagctccagtctttactaaaagaaggctgtcgatataaggtg
tataatctcaccacaacagattcaaagaaacaaggtggaaacacaaccgttcagctaagt
ggaacaaaaaaaacacaatttgaggaccttcaggcatccgaggaattgttgtcaacatat
tttcagccaagggtctcggccacattcatcgatctccaagatccagaattccattcgttg
tgtggtgaggttgatctcacaggatacgtcatcagtataatagatggacaaggtttctca
cctgctttttacctaactgatgggaaacaaaattttgtaaaagtgcgttgtttcagcagc
ttcgctcagtcaggcttggaagatgtaataaagccaagtgtccttttagctttaagcaac
ctccaactgagaggtcaggcaacatcacccactccagtcttgtacgctggagatctaacc
gtcttctccacaaaccccaaagaagttcatctgcaggaatccttcagccagctcaaaacc
ctggttcaggta
DBGET
integrated database retrieval system
