Tetraodon nigroviridis (spotted green pufferfish): GSTEN00030275G001
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Entry
GSTEN00030275G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GSTEN00030275G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tng03000
]
GSTEN00030275G001
03021 Transcription machinery [BR:
tng03021
]
GSTEN00030275G001
Transcription factors [BR:
tng03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
GSTEN00030275G001
Transcription machinery [BR:
tng03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
GSTEN00030275G001
RNA polymerase III system
TFIIIB
GSTEN00030275G001
RNA polymerase I system
SL1/TIF-1B
GSTEN00030275G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-ProteinID:
CAG09093
UniProt:
Q4RR89
LinkDB
All DBs
Position
14
AA seq
185 aa
AA seq
DB search
MDEKEEEELDVTISNVVATFRTGCHLNLYAIACNGHNVIHRPERGTVTMQLRKPRVTANI
WSSGKVICTGATSEQEAKMGARRIARCVQKLNFPVSFSAFKVVNVMVTSAMPFKISLIDF
TKRNRPVTRYEPELHPAAMYTMRHPKATVRVFATGSVTIFGPSVANVTVAIQNIYPLLSA
CRRPA
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggacgagaaggaggaggaggagcttgacgtcaccatcagcaacgtggtggcaaccttc
aggaccgggtgccatctcaacctgtacgccatcgcctgtaatggccacaacgtcatccac
agaccagaacgcgggacagtaacaatgcagctccgcaagcccagggtaacagccaacatc
tggtcttcagggaaagtcatctgcacaggagcaacgagtgaacaggaggctaagatgggt
gctcgcaggatagcgcgctgtgtgcagaaactgaacttcccggtatccttttctgctttc
aaagttgtaaacgtgatggtcaccagtgccatgccctttaaaatctccctgattgacttc
accaagaggaaccggcccgttaccaggtatgaaccagagctgcaccctgctgccatgtac
accatgagacatcccaaggctaccgtgagggtgttcgccactggcagcgtcaccattttt
ggaccaagtgtggccaacgtgaccgttgctattcagaacatctaccctctgctgtcagcg
tgtcgcagacccgcgtga
DBGET
integrated database retrieval system
