Tetraodon nigroviridis (spotted green pufferfish): GSTEN00030293G001
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Entry
GSTEN00030293G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K19538
retinitis pigmentosa 1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tng03037
]
GSTEN00030293G001
04812 Cytoskeleton proteins [BR:
tng04812
]
GSTEN00030293G001
Cilium and associated proteins [BR:
tng03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
GSTEN00030293G001
Cytoskeleton proteins [BR:
tng04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
GSTEN00030293G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCX
Motif
Other DBs
NCBI-ProteinID:
CAG09109
UniProt:
Q4RR73
LinkDB
All DBs
Position
14
AA seq
1824 aa
AA seq
DB search
MSSPKRGFQCFNAVGAEGCKSSPPLKSHRSCFPRISQHGVLAHHEPVEECYHCSEYRRAQ
VLEALDAHTTLFCRSHLPCIHHHPQPYLLRRPEEPPAVRSGYSHHQRNNKRVVLVKNSDP
SFRRAIFFHHQRVPSFGLFLEEISELMQYNVRKVFSLEGRKIDNIQGLVQCPDVLVCVGR
EPSHPSIEENLQKSIRLPKLNLRARSDVCNEEQEGATENGAISPDRSARLSLSSDKVLSD
GTESQNAGSSIGDVRQDDIEKRVCVNKDGSLSMEMKVRFRLQNKETLHWSTKVRKTRDKS
SEYLGGHPFAQVGDINYSESENVSVGDHDEDGVDGCHLRHKEEPQCPHCQEYDIKNIPGA
HGARRCVHTSSSSASSHTLVSRKTQVERQTLSRSSDEHTEQVLEHETCVETVEYCTVQGK
SCSPQSSVQDDNPEQAGSASNSQVLADDAPQSCGGSPTRPASLSPTDGTSNSSSKSRKSK
KLHTCQCKPSTEQEGEGRIVAERDQPSAMSDKSKASGQSQKSEEIQSEECGESAENRPRS
APSVHSDASDLVSVTEEKTAGPEEDSNDERAPSSASREKAEETEQRTTSAMSAASTGSAG
GKTEECDTAAGENTPNSSEERVPSAMSVRTDASANIKASEVSAEEDAEDETESISPSLSL
HSENTDGNLEELEGSKEGGEAQERAPSVVSANSNSATLKTPDCQSEETNKDEVEEESVPY
NPCDGRDQHREEDMEAARSSSVLSSNPAEAEAMEGAGRCLSSRSGKSVRSSSSVRSRKSA
VSNLSEAERLSGNEEGERAPSAMSAVSAKSGASARSRQSKMSARQTEEISDFSENKSTKE
ESEERPHSRISQKSAKSSVSARSTRTDVSAKSSLSKSADISGEAENTATVERAPSNMSTV
SARSKASVLSETSPGSAAAPESCADGSEVHVERPPSGLSARSAKSSKTNVSNVSRRSKVS
VIIVEDGVVNPEGGVVEEVEAKERAPSVLSAKSAKSHTSRKSVKSNASQLRPGSPERPQS
SQSDKTATSSVSATSAASKRILDQAEETISDHEEHVRRSPSILSVRSEQSTTSNISAVSK
KSKSSKVLTADRPDDASEEMHEDNRSVSSMSVHSTKSALSVQSSRSKRSTDAPRESTPRP
KSHASTVSVTSDVSGVPPDEDTELRSESVVSARSSSVRSKASRSSRSARSTQNLDEDSKD
RAESRVSERSVNTEISGSNTNDEPGHEEPKVRTSSALSGQSARSRASGKTPSVASGLCSD
HESGVEDTHEQAQRAVSASSTRTAGSEKSSKSKGPASPAEEEEEKSCLSGKPDTSDHEEE
GAEADTERRSPSNMSQSAKSTISASSKSTREPSLQERGGTVQRSPSALSVKTVRSDKSAL
SVKSDALKLSDNSEVPVDAAVGSAEDTEGRAKSSLSARSRRTNVTSVSANSRCSQVLNKE
EETRAPSATSNKSAGKSNSQTAGISAEENAGSDENERSPSTMSAKTRSSLSRRSAKSKVS
ERTAVTQPEDPEGSGKSEKTSVSARNVKTSVSVTNYNETETGDGDDIADADTEVVSEKAT
SALSAKSNLSARSKKSNVNTAENTLDIKTTLSPISAKSPRRHVVSPASSSKSRLSEHSKT
SKRTKEERSLSGHSGAKSEQSKIPDIWTVEHVEDQDSAQPNLNKKHSIRRSESEETDLSQ
TLSSSDFVKERDLPPAEAKPHLDLGRKSADRKSDKSGKSRKERVNGEDNKLVPSRLPNTS
PNEVVNEWLKTLPADSDMYDMEGLHETSNGEKNDHATEEPEGKRNGATEAEDTTEAXXXX
XXXXXXXXXXXXXVRRRSCVTRFL
NT seq
5475 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgccaaaacgcggcttccagtgcttcaacgcagtcggtgcggaaggctgcaag
tcttctccccccctcaagtcgcacaggagctgctttcccaggatctcccagcatggcgtc
ctggcccaccatgaacctgtggaggagtgttaccactgctctgagtacagacgtgctcag
gtcctggaggcgctggacgcacacaccacgctcttctgtcgctcccacctgccgtgcatc
caccatcacccccaaccgtaccttctcaggaggcctgaggagccccctgcggtgcgctca
ggctatagccaccatcagaggaacaacaagagggtggttctggtgaagaacagcgacccc
tccttcaggagggccatctttttccaccaccagagagtgcccagctttggcctcttccta
gaggagatttcagagctgatgcagtacaatgtcaggaaggtgttctctctggaaggccgc
aagattgacaacattcagggtctagtccagtgccctgatgttcttgtgtgtgtgggccgt
gaaccctcccacccgtccatcgaggaaaaccttcagaaatccatcagacttccaaagctg
aaccttcgcgctcgctctgatgtttgcaatgaagaacaggagggggcaacagagaacggt
gccatcagtcctgacagatcggccaggctgtcgctgtcatccgacaaggtcttatcggat
gggaccgagtctcagaatgcaggatcaagcatcggtgacgttagacaggatgacatagaa
aaacgagtctgcgtcaacaaagatggcagtttgtccatggaaatgaaggtgcgcttccgg
ctacagaacaaagaaaccctacactggtccacaaaggttaggaagaccagagacaagagc
agcgaatatctcgggggacacccttttgcacaggttggtgatataaactattcggaatct
gagaacgtctcggttggagaccatgatgaggatggcgttgacgggtgtcacctcaggcac
aaggaggaacctcagtgccctcactgccaggaatacgacatcaagaacatccccggggca
catggggcccgtcgatgcgttcatacttccagctcaagcgcgtcctcccacacgctggtc
tccaggaagacgcaggtcgaaagacagaccctgtccagatcgagcgatgagcacacagaa
caagtgctggagcacgaaacctgcgtggagaccgtggagtactgcaccgttcagggaaaa
tcctgctctccacagtcctccgtccaggacgacaatccagaacaagcaggatctgcatca
aactctcaagtactggcagacgatgccccacagagctgtggaggatcaccgacacggccg
gcatctctgagtccaacagacggaacatctaactcctccagtaagtccagaaaatccaag
aaattgcacacttgtcagtgcaaaccatctactgagcaggagggtgaaggacgaatcgtg
gccgagagagaccaaccaagtgccatgtctgataaatcaaaagcctctggccaatcacag
aagtctgaagaaatacagagtgaggagtgtggagagtcagcagagaacagacccagaagt
gccccgtcagttcattcagatgcctccgatcttgttagtgtcacagaagaaaagacagct
ggaccagaggaggacagcaacgacgagcgagcgccgagctccgcgtccagagaaaaagct
gaagaaaccgagcaacgaacaaccagtgccatgtcagctgcctccacaggctctgcggga
gggaaaacagaagaatgtgacacggctgcaggtgaaaacactccaaactcctcagaggag
agagtccccagcgccatgtcggtcaggaccgacgcttctgccaacataaaagcctctgaa
gtgtcagcggaagaagatgcggaggacgaaactgagagcatttcaccttccctgtcgttg
cattcggaaaacactgatggtaatttagaagagctggagggaagtaaagagggcggagag
gctcaggagagagcgccgagtgtggtgtcagccaattcaaactcagcgacattaaaaact
cctgactgtcaaagcgaagagacgaataaagatgaggtggaagaagaatctgtaccatat
aacccctgtgatggcagggaccaacacagagaggaggacatggaggccgcaagatcctcc
agtgtcttgtcctcaaacccagctgaggctgaggcgatggaaggtgcagggaggtgtctg
agcagcaggtccggtaaatctgtgaggtccagttcatctgtgaggtccagaaaatcagca
gtgtcaaatctttcagaggcagagagactgagcggaaacgaagaaggcgaaagagcgccg
agcgcaatgtcggctgtgtccgccaagtctggcgcatctgcgagatcaaggcaatccaag
atgtcagctcgtcagacagaggaaatatctgacttttcagaaaataagagcactaaagag
gagagtgaagagagaccacacagtagaatatcacagaaatcagcaaagtccagcgtgtcg
gccagatcaacccggacggatgtttctgccaagtccagcctgtcaaagagtgcggatatt
tcaggcgaagctgagaatacggcaactgtggaacgagccccgagcaacatgtcaaccgtc
tctgcaaggtccaaggcttcagtgttgtctgagacgtcaccaggttctgcagctgctcct
gaaagttgtgccgatggatctgaagtccatgtggagaggcctccgagcggcctgtcagcc
agatcagcaaaatcatccaagacaaatgtttcaaatgtatccagaaggtcaaaggtttct
gtgatcatcgtagaggacggtgttgttaatccagaaggtggagttgttgaggaggtggaa
gcaaaggagagagcaccgagtgttctgtcagcaaaatcagccaagtcgcacacttcaaga
aaatcagtcaaatcaaatgcttctcagcttcgtcctggaagtccagagaggccacagagt
tcccagtcagataagacggcaacgtcgagtgtttctgccacatctgctgcgtcaaagagg
attctggatcaagctgaggaaaccatctccgatcacgaggaacatgtgcggagatctccg
agcatcctgtcagtcagatcagaacaatccaccacctcaaatatttcagccgtttcaaag
aaatctaaatcttctaaagttcttactgcggatcgcccggacgatgcttctgaagagatg
catgaagacaacaggtcagtcagctccatgtctgttcattccacaaagtcggctttatcg
gtgcaatcgagcagatcgaaacgttccaccgatgctccgcgggaaagcacccccagaccg
aagtcacatgcttctacagtatccgtgacatccgacgtctcaggggttcctccagatgaa
gacaccgaactcagatcagagagcgtagtgtctgcaaggtcgagttctgttcgctcaaaa
gcatcaagatcctcgaggtctgcacgaagcactcagaacctagatgaagacagcaaagac
agagcagaaagccgggtttctgagagatctgtcaacacagagatctctggcagtaacacc
aacgatgagccaggtcacgaggaaccaaaagtcagaacatcgagcgccctgtcaggtcaa
tcggcaagatcacgtgcttcaggaaaaactccatcagttgcatcgggactttgttctgat
cacgaaagcggcgtagaagatacccacgagcaagctcaaagggcagtctcagccagttcc
acacgtacagccgggtctgaaaaatcaagcaagtcaaagggaccagcgagtccagctgag
gaggaggaggagaagagctgcctgtccgggaaaccagatacatccgatcatgaggaagaa
ggtgctgaagcagacacggagcggagatcaccaagcaacatgtcccagtcagccaagtcc
accatttcagcctcatcaaagagcacacgtgaaccttctttacaagagcgcggaggaacc
gtgcagagatcacccagcgccctgtcagttaaaactgtcaggtcagacaaatctgccctt
tctgtaaagtcagacgctttaaagctgtctgataattcagaggttccagtagatgctgct
gtgggaagcgctgaagacaccgaggggagagccaaaagctcgctgtcggctcgatccagg
agaacaaatgtgacatctgtatctgcaaattccagatgttctcaggttcttaataaagaa
gaggagactcgggctccgagcgcaacatcaaataaatcagctggaaaatcaaattcacaa
actgctggaatttctgctgaggaaaatgcaggaagcgatgaaaatgagagatcaccgagc
accatgtcggccaaaacaaggtccagtttgtctcggaggtcggccaaatcaaaagtttca
gagcgcacagctgtcactcagccagaagacccagaaggtagtggaaaatcagagaaaaca
agtgtttctgcgagaaatgtgaaaaccagtgtgtccgtgactaactacaatgaaactgaa
acaggagacggtgatgatattgccgacgcagacactgaagtggtatcagagaaggctacg
agcgccctgtcggccaagtcaaatttatcagcccgatcaaagaaatccaacgttaacaca
gctgaaaatactctggatataaagacaacactcagccccatttctgcaaaatctcctcgt
cgacacgtagtttctccagcctcgtcctcaaaatccaggttgtcggagcattcgaagacc
tcgaaaagaacaaaggaagaacgttctttatctggtcattcgggagcaaaatcagaacaa
tctaaaatacctgatatttggacagtggagcacgtggaagatcaggatagtgcccaacca
aacctaaacaaaaagcactcaattcgccgcagcgaatccgaagaaaccgatttgtcgcaa
accctgtcgagttcggactttgtaaaagaaagagaccttccacctgctgaagctaaaccc
catttggacttggggaggaaatctgctgacaggaagagtgacaagagcggcaaaagcaga
aaggagcgcgtaaatggggaggacaacaagctggtcccctcaagattgcccaacacctcc
ccgaacgaggtggtgaacgaatggctgaaaacgctgccggcagacagcgacatgtacgac
atggaggggctccatgaaacctccaacggagagaaaaatgaccatgcaacagaagaacca
gaggggaaaagaaatggcgccacagaagctgaagacacaacggaagcgnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagttagacgccggtcgtgtgtc
acccgtttcctgtga
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