Tetraodon nigroviridis (spotted green pufferfish): GSTEN00030522G001
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Entry
GSTEN00030522G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
GSTEN00030522G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tng03400
]
GSTEN00030522G001
DNA repair and recombination proteins [BR:
tng03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
GSTEN00030522G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
DUF6005
VWA
DUF7647
Motif
Other DBs
NCBI-ProteinID:
CAG09291
UniProt:
Q4RQP1
LinkDB
All DBs
Position
2
AA seq
727 aa
AA seq
DB search
QSALMLCMDVGFSMSNSAPGEEPPFELAKKIIQKFVQRQVFAESKDELGLVLFGTDSTNN
LLHQDGQYENISVFRELSVPDFDLLEQIQNQLQPENQQADWMDALVVCMDLLQRARTGKK
YDRLNIVQLTDLNIQASSDQLDIIIQNLKSSDITLQFFLPFPAEDDEDGGGDGPRSESGH
PGRGKGLSRDQKEGLDMMKHIMLSLDEDDGLDQIYTFRNAIEQLRMFKQIERRPMAWPCL
LTVGSCVSIRIVGYKAVMQEKLKKTWMTVDAQTNQKEVIKRETVYCLDDDNETEVQVTET
IQGFRYGSDIVPFSKVDQEQMKYKHDGKCFAVLGFTKQNLVHRHQFIGNQVIKLFAAKDD
EHAGVALSALIRALRELEMVAIVRYAYDRRSNPQVGAAFPCIKQHYECLMYIQLPFVEDL
RQFSFPSFDNKKVTPTETQLSAVDSLIDSMMLVEEGDDGKPKDMFKVHHIPNPEFQRLFQ
VLKPKCLHHRVVNPGTPLPPIEPWLKAVLGRPDVIGQRCQAPLEELKRVFPLTQVEKKKN
LKTSAEVFGKDSGEPDGKKAKHDEEEEEEDFNLANITEGSITSVGSVDPARDFCFLVKQK
SIPFGEVCQQLIQRIEQLLSNRNTEYYTKSITGIQAFREQSVKLGNADLYNNYLQSLKGS
ITNRQLEVFWDLLVQDGLTLISNDQVKGSAIFNAEANQFLVGVEKKEEVAPPPAEDNEDV
DDLLDMM
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
cagtcagccttaatgttgtgcatggatgttggattttccatgtccaattctgcccctggt
gaagagcccccatttgaacttgccaaaaaaataatacagaaatttgtccaacgtcaggtt
tttgcagaaagtaaggatgaactgggtttagttctgtttggaacggactccaccaacaac
cttctgcaccaggacggccagtatgagaacatctcggtgttccgggagctctcggttccc
gactttgacctcctggagcaaatacagaatcagctccaaccagagaatcagcaggctgat
tggatggatgcgcttgtcgtctgtatggacctcctccagagagcaagaacaggaaagaag
tatgaccggctcaacatcgtccagttgactgatctcaacattcaggccagctcagaccaa
ctggatattattattcagaacttaaagagcagtgacatcactctgcagttttttttacct
tttccggcggaggacgatgaagatggtggaggagatggacccagaagtgaatctggtcac
cctggcaggggcaaaggtctgtcacgggaccagaaggaaggcctggacatgatgaaacac
atcatgttgagcctcgatgaagacgatggcttggatcaaatctacacattcaggaatgca
attgagcagctgcgcatgttcaagcagatcgagaggagacccatggcctggccctgtctg
ctgactgttggcagctgtgtgtccatccgaattgttggatacaaagcagtcatgcaagag
aaattgaagaaaacttggatgacagtcgatgctcaaaccaaccagaaagaagttataaaa
agagaaaccgtgtactgtttggatgatgacaacgagacggaggtacaagtgactgaaacc
atccaagggtttcgctatggcagcgatatagttccgttctccaaagtggatcaggagcag
atgaaatacaagcatgatgggaaatgcttcgctgttcttggcttcaccaaacagaatctg
gtgcaccgccaccagtttataggaaaccaagtcataaaacttttcgctgccaaagatgat
gagcatgctggggttgccctgtccgctctcatcagagcactgcgtgagcttgaaatggtg
gccattgtgcgttacgcttacgaccgacgcagcaaccctcaagtgggagcagctttcccg
tgcattaagcagcactatgagtgtctgatgtacatccagctgcctttcgtggaagacctc
agacagttttcatttccttcctttgataacaagaaggtcacgcccacagaaactcagctg
tctgctgtggacagtctcatcgactccatgatgttggtggaggaaggtgatgatggaaag
ccaaaggacatgttcaaggtccaccacatccccaaccctgaattccagagacttttccag
gtactgaagccaaagtgcctgcatcatcgagtagtgaatcctggcactcctcttcctccc
attgagccatggctgaaggctgttcttgggcgccctgatgtcattggtcaacgttgccaa
gctccactagaagagctgaagagggtgtttccactcacacaggtggagaagaaaaagaat
ctaaagaccagcgctgaggtttttggcaaagattctggggagccagatggcaagaaagca
aaacacgatgaagaagaggaggaggaggattttaacttggcaaacatcactgaaggctct
atcacttcggtgggaagtgtggatccggcacgagatttctgctttctggtcaagcaaaag
agcattccttttggagaggtctgtcagcaactcattcaaaggattgagcagttgcttagc
aacaggaacacggagtactacacgaaaagcatcaccggtatccaagctttcagagaacag
tcagtaaagctagggaatgctgatctgtacaataactacctgcagtccctaaaaggaagc
atcacaaacaggcagctggaagtcttttgggacctgcttgttcaagatggtttgacactg
atcagcaacgaccaagttaaaggaagtgcaatattcaacgccgaagccaatcagtttctg
gttggtgtggagaagaaagaagaagtagctccacctcctgctgaagataatgaagatgtt
gatgacttgctggacatgatgtaa
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