Tetraodon nigroviridis (spotted green pufferfish): GSTEN00030545G001
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Entry
GSTEN00030545G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K12821
pre-mRNA-processing factor 40
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GSTEN00030545G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tng03041
]
GSTEN00030545G001
Spliceosome [BR:
tng03041
]
Complex A
U1 snRNP components
U1 related factors
GSTEN00030545G001
Complex B
GSTEN00030545G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
Lectin_N
Motif
Other DBs
NCBI-ProteinID:
CAG09312
UniProt:
Q4RQM0
LinkDB
All DBs
Position
2
AA seq
843 aa
AA seq
DB search
MGPPGIPPHFPPMGLPPMAQRPPSMTPMPPGILPPGIMPPMGTPPLGQVNQMPSMIPPMM
PGMLLPPRISTASVQPTGPSTTNGSTAEEQPKKKALWTEHKSMDGKTYYYNTETKQSTWE
KPDDLKSPAEQMLSKCPWKEYKSDTGKPYYYNSQTKESRWTKPKELEDLEALIKAEENGT
TETAAPAATAAPVVQAESTATVTAVMEAETTAAVSEEVVSQATVPVTAEVKTADAPVAAA
ESPAATEAPASVETPKEERPELQKKIYKWNTKEEAKQAFKELLKEKGVSSNSSWEQAMKL
IINDPRYSALPKLSEKKQAFNAYKVQTEKEEKEEARIKYKESKETFQRFLENHEKMTSTT
RYKKAEQMFAELEVWSCVPERDRLEIYEDVLFYLAKKEKEQAKQLRKRNWEALKNILDNM
ANVTYRTTWSEAQQYLLDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKTLL
RERRRQRKNREGFQKFLDELHDHGQLHSMSSWMEMYPSLSSDIRFANMLGQPVVQAVCMY
LSLLLISADVAVFHVFLLTLFPSAVMQDKSFPVEINTNFEDFGSVISSDKRATTLDAGNI
KLAFNSLLEKAEAREREREKEEARKMKRKEAAFKNMLKQATPPLEPETAWESVRDRFLKE
SAFEDITLEAERKRIFKDFMHVLEHECQHHHSKTKKHSKKSKKHHRKRSRSRSGSESEEE
DYHKKKKRSQSKSPSERSSSGESERSYKKSKKHKKKTKKRRHKSASPDSDNEKKGRERDG
KREKDLEKEKENDKSRGKSRSESKQKSPKRKAAKEEGGWDTSGSELSEGELEKRRRTLLE
QLD
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgggaccaccaggaataccacctcattttcctcccatgggattgcctccaatggcacaa
cggccacccagcatgacacctatgccccctggtatcctccctcctgggataatgccacca
atgggaacaccaccattgggccaggtaaaccagatgccgagcatgatcccacctatgatg
ccaggaatgttgttgccacctcgaatatcaactgcatctgtgcagccaacaggaccgagc
accacaaatggatcaacagcagaggagcagccaaagaagaaggcactgtggacagaacac
aaatcaatggatgggaagacctattattacaacacggagactaaacagtccacgtgggag
aaaccagacgaccttaagtctcctgcagagcaaatgctttctaaatgtccctggaaagag
tacaagtcagacacagggaagccttattactacaactcgcagaccaaggaatccagatgg
accaaacccaaagagcttgaggatctggaagccttgatcaaagcagaggaaaatgggaca
actgaaacagcggctcccgcagccaccgcagctcctgtggtgcaggcagaaagcacagcc
actgtgacggcagtaatggaggcagaaactacagcggcagtctcagaggaagtagtgtcc
caggcgaccgtgcctgtcacagctgaggtcaagactgcagatgcacctgtggctgccgca
gagagccctgccgccacagaagccccagccagtgtcgaaaccccaaaagaggaacggcca
gaacttcagaagaaaatctacaaatggaacacaaaagaggaggccaagcaagccttcaaa
gagctgctgaaggagaagggagtgtcatccaactcctcttgggaacaggcaatgaaactg
attatcaacgatcctcgctacagtgcccttcccaaactgagtgagaagaaacaagccttt
aatgcctacaaagtacagacagagaaggaagagaaagaggaggccagaatcaaatacaag
gagtccaaagagacatttcagcggttcttggagaaccatgagaagatgacttctaccacc
agatacaagaaagctgagcaaatgtttgctgagctggaggtgtggagttgtgtccctgag
agagacaggctggaaatttatgaagacgtgctgttttaccttgcaaagaaagagaaggaa
caagccaagcagctaagaaagaggaactgggaagctcttaagaacatactggataacatg
gctaatgtcacatatcggaccacctggtctgaggctcagcagtacctgttggacaacccg
acctttgcggaggatgaagagctgcagaatatggacaaagaagatgccctcatttgtttt
gaggagcacatcagggctctggagaaagaggaagaggaggagaaacagaagactcttctg
agagagagaagacggcagcgcaaaaacagagaaggtttccagaaatttctggacgagctc
catgatcatggccagcttcactccatgtcgtcctggatggaaatgtacccgagtctgagc
tccgacatccgctttgccaacatgttgggacagccagtggttcaggcggtgtgtatgtac
cttagcttgctgttaatttctgctgatgtggctgttttccatgtctttttgctgactctt
tttccatctgctgtgatgcaggacaaaagttttccagttgaaatcaacaccaatttcgag
gactttgggtcagtcatcagttcagacaagcgggccaccacactggatgctgggaacata
aaactggccttcaacagtctgctggagaaggcagaggcgagggagagagagcgagagaaa
gaagaggccaggaagatgaagaggaaagaagcagcgtttaaaaatatgctgaagcaggcc
acaccgccactggagccagagaccgcctgggagtctgtgcgagatcgattcctgaaagaa
tctgcttttgaggacataactctggaggcggagaggaaaaggatattcaaggacttcatg
catgtcttagagcatgaatgccagcatcaccattccaagacaaagaagcactcaaagaag
tccaagaaacaccaccgaaagcgatcccgctcccgatcgggctcagagtccgaggaagag
gactatcacaagaagaagaagagatctcagtccaagtctccttctgaacgctcctccagt
ggagagtctgagagaagctacaaaaagtccaagaagcacaagaagaagaccaagaagagg
cgtcacaagtctgcgtctccagactctgacaatgagaagaaggggagagagcgagacgga
aagcgcgaaaaggacctagagaaagaaaaggagaacgacaagtccagagggaagtctcgt
tctgagtctaaacagaaatctcctaaaagaaaagcagccaaagaggagggtggctgggat
acgtcaggcagcgagctgagtgaaggagagctagagaagaggaggagaactctactggag
cagctggac
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