Tetraodon nigroviridis (spotted green pufferfish): GSTEN00030759G001
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Entry
GSTEN00030759G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K08737
DNA mismatch repair protein MSH6
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GSTEN00030759G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tng03400
]
GSTEN00030759G001
DNA repair and recombination proteins [BR:
tng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
GSTEN00030759G001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
TFIIF_alpha
MUM1-like_PWWP
Motif
Other DBs
NCBI-ProteinID:
CAG09472
UniProt:
Q4RQ60
LinkDB
All DBs
Position
17
AA seq
1235 aa
AA seq
DB search
FSAGALVWAKLEGHPWWPCMVVPQPVSGQQMRGRGRDQRIHVHFFDEPPTRGWVSTRYVR
EYQGSDSSGAKPGGLFFCGKPVIQQAMKLADEAMSDSPKKRLKMPLCMDLSDEEDEEEEM
EVDKSTLTDEEISEEEQGSEKEKPARGSRQSSRASAPQGNKPKRRRIIEASDSDGSVSSD
EEDTSQETEEDSPVKPTKRKRVAAKSPPAKAKAPPTPSGPPKPARAALSADTKSRLSAFS
APESLESQANGSGTGAEAAAWDHEKLEWLQEGRRRDGRRRRQSDADYDAATLYVPEDFLN
RVTPGMRRWWQLKSQMFDTVIFYKVGKFYELYHMDAVVGVNELGLTFMKGTWAHSGFPEI
GFGRFSDGLVQKGYKVARVEQTETPEMMEARCKAMAKPSKFDRVVRREVCRVLTRGTQTY
SVLDGAPAECQSKFLLGLKEKAEEESSGRSRTYGVCFVDASVGCFHVGQFADDRHCSRLR
TLIAHHPPAEVLFERGNPSGETRKVLKASLSSALQEGLSAGSQFWDAQKTLKSLSEEDYF
REGADEGQEGRRALPAPLKQMTSDSDSLGLTPRDGYELALSALGACTFYLKKCLVDQELL
SMANFEEYVPVDVQMEKAAGPDSFFAQTRQRMVVDGVTLANLEIFQNGSGGAEGTLLERL
DTCSTPFGKRLLKQWLCAPLCNPSSIKERLDAVEDLMGLQAQAGEVSDLLKKLPDLERLL
SKIHGIGTPLKGQDHPDSRAVLYEEVTYSKRKIADFLSALEGFKTMQEIISVLAAVSGDC
RSTLLRQVIRVKREGGGLFPDLSVELRRWEKAFDHQKARNTGVITPKAGFDPEYDQALAG
IRGREGELNDYLDRQRKRLGCRNMAYWGTGRNRYQMEVPDSVSERSVPQEYEVKSTKKGW
KRYVTKETERLFSELQAFEEKRDAALKDCMRRLFYNFDKNYRDWKAAVECMAVLGNRARS
SSSLVRGAVAFECVDECDDISESGSSADVLLAFSRYSQGGDGPMARPEVAPPSRGRAPFL
ELTGSRHPCVTKTFFGDDFIPNDIFIGCRGSGEEEEKGDATCVLVTGPNMGGKSTLMRQA
RESTFFVELSETASILRHATKHSLVLLDELGRGTATYDGTAIASAVVKELAERICCRTLF
STHYHSLVEDYAKNHAVRLGHMVRNTLQACMVENECEDPSQETITFLYKFISGACPKSYG
FNAARLASLPEEVIQCGQGKAREFERSTTSLRLFR
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
tttagcgccggtgccctcgtgtgggccaaactggagggtcacccctggtggccctgcatg
gtggtcccccagcccgtgagcgggcagcagatgaggggccgcggccgggaccaacgcatt
cacgtccatttctttgacgagcctccaacgaggggctgggtcagcaccagatacgtcaga
gagtaccaagggtctgacagcagcggcgcgaagccaggagggctcttcttctgtggaaaa
cccgtcatccagcaggcaatgaagctcgctgatgaggctatgtctgacagccccaaaaaa
aggctgaaaatgcctctttgtatggatttgtctgatgaagaggacgaggaagaagaaatg
gaggttgacaaatcaacacttactgatgaagagattagtgaggaagaacaaggaagcgag
aaagagaagccggccagaggcagccgacagtcgtcccgcgcttcagcgccgcagggaaat
aagcccaagaggcggcgcatcattgaagcctcggacagtgacggctcagtcagcagtgac
gaagaggacacgtcgcaggagacggaagaagacagcccggtaaagccgacgaagcgcaaa
cgagtggccgccaagtcgccgcctgccaaagccaaggccccgcccactccctccggccca
ccaaaaccagctcgggcggcactttcggccgacacaaagtcccgcctgtcggcgttctcg
gcgcctgagagtttggagagtcaggccaacgggtcgggcacgggcgcggaagccgcagcc
tgggaccacgagaagctggagtggctgcaggagggcaggagaagagacggccggaggcgc
cggcagtcggatgcggactacgacgccgccaccttgtacgtgcccgaagacttcctcaac
agagtcaccccgggcatgcgccgctggtggcagctgaagtcccagatgttcgataccgtc
atcttctacaaggtgggcaagttttacgagctctaccacatggacgcggtggtgggcgtc
aacgagctgggactgaccttcatgaagggcacgtgggcgcactcgggctttcccgagatc
ggcttcgggcggttctccgacggcctcgtccagaaaggctacaaggtggctcgggtggag
cagacggagaccccggagatgatggaggcgcggtgcaaggccatggccaagcccagcaag
ttcgaccgcgtggtcaggagagaggtgtgccgggttctcacccgcggcacccagacctac
agcgtcctggacggcgctccggccgagtgccagagcaagttcctgctgggcctgaaggag
aaggcggaggaggagagctccgggcggagccgcacttacggcgtctgcttcgtggacgcc
tcggtcggctgcttccacgtgggtcagtttgcagacgaccgccactgctcgcgcctgcgc
accctgatcgcccaccacccccccgccgaggtgctcttcgaaagggggaacccgtctggc
gaaactcgcaaagtcctgaaggcttctctgtcctccgctcttcaggagggcctgagcgct
ggtagccagttctgggatgcccagaagaccctcaaaagcctctcggaggaagactacttc
agagaaggggcggatgaaggccaggaaggccgcagggctctcccagcgccgctgaagcag
atgacctccgacagcgactcgctgggcctgactcctagagacggctacgagctggccctg
tcggcgctgggcgcctgcaccttctacctgaagaagtgcctggtggaccaggagctcctg
tccatggccaactttgaggagtacgtgccggtggacgtccagatggagaaagcggccgga
ccggacagtttcttcgcccagacccgtcagaggatggtggtggacggagtcaccctggct
aacctggagatcttccagaacggctccggaggagccgaggggaccttactggagcgcctg
gacacctgctccaccccgtttgggaagcgactgctgaagcagtggctgtgcgcgcccctg
tgcaacccctcgtctattaaagagcgcctggacgcggtggaagacctgatgggccttcag
gcccaggccggcgaggtgtccgacttgctgaagaagcttccggatttagagcgtctgctg
agcaagatccacggcatcggcacccctctgaagggccaggatcaccccgacagcagagcc
gtcctctacgaggaggtcacctacagcaagcgcaagatagcggacttcctgtccgccctg
gagggcttcaaaaccatgcaggagatcatctcggtcctggctgccgtctcaggcgactgc
cggtccacgctgctgcgccaggtcatccgtgtgaagagggagggaggcgggctctttccg
gacctttccgtggaactcaggcgctgggaaaaggccttcgaccaccagaaagcccgcaac
acgggcgtcatcactcccaaagccggcttcgaccccgagtacgaccaggccctggccggg
atccggggccgcgagggggagctgaacgattacctagacaggcagaggaagaggctgggc
tgtaggaacatggcctactgggggacggggcgcaaccgctaccagatggaggtgcccgac
agcgtctcggagaggagcgttccccaggagtacgaggtcaagtccaccaagaagggctgg
aagcgctacgtaaccaaggagacggagcgcctcttctcggagctgcaggcctttgaggag
aagagggacgctgctctgaaggactgcatgaggaggctgttctacaactttgacaagaac
tacagggactggaaggcggctgtggagtgcatggccgtgctgggtaatcgcgcacgctct
tcttcctccctcgttcgtggagcagttgcttttgaatgtgttgacgagtgtgatgatatt
tctgaaagcgggagctctgcagatgtgttgctggccttctcccgctacagccagggcggg
gatggcccaatggcccgaccagaggtggcgccgccctcgaggggccgagcacccttcttg
gagctcaccgggtcccgccatccctgcgtcaccaagacctttttcggcgacgacttcatc
cctaacgacatattcatcggctgtcggggcagcggtgaagaagaggagaaaggtgacgcc
acctgcgtcctcgtcacaggacccaacatgggtgggaagtccactctgatgagacaggcg
agggagagtaccttctttgtggagctcagtgagacggcgagcatcctgcgccacgccacc
aagcactccctcgtgctcctggacgaactgggaaggggcacagccacgtatgacggcaca
gccatcgccagcgctgtggtgaaggagctcgctgagaggatctgctgtcgcacactcttc
tccacacactaccactcactggtggaggactacgccaaaaaccacgccgtgaggctgggc
cacatggtgaggaacactctgcaggcttgtatggtggagaacgaatgtgaggatcccagt
caggagacgataacgttcctctacaagttcatctccggcgcctgtcccaagagctacggc
ttcaacgctgctcggctggccagcctgccggaggaggtgatccagtgcggtcaagggaag
gccagggagtttgagcggagcaccaccagcctccggctgttcagg
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