Tetraodon nigroviridis (spotted green pufferfish): GSTEN00030946G001
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Entry
GSTEN00030946G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K24155
rabconnectin-3a
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
GSTEN00030946G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tng04131
]
GSTEN00030946G001
Membrane trafficking [BR:
tng04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
GSTEN00030946G001
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
GSTEN00030946G001
RAVE complex
GSTEN00030946G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_HPS5
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
NBCH_WD40
PEP5_VPS11_N
Beta-prop_Vps41
Beta-prop_SPT8
Motif
Other DBs
NCBI-ProteinID:
CAG09601
UniProt:
Q4RPT1
LinkDB
All DBs
Position
12
AA seq
2866 aa
AA seq
DB search
AYASGCDVVILGSDFERLQIIPGAKHGNIQVGCVDCSLQGGQIAASYGSTVCIFEPVQQQ
DQKDPSLPKVNCQWQKTGQFVLKSVVRNLAWHPTGSSLLTGSNSLQLWSVVSEDDEAEEE
KQTKKIRGNSGCAWSCIWHSKTASPISLMKFSPDGEFFATAGQDDCLVKVWYSTSKWRSG
VSGLFTPPEDSITVQGELSFSFIYLAHPRSVTGFSWRKTSKYMPRGAVCNVLLTSCKDSV
CRLWAETLLPGDSHLSGYHSNLTASQHIDTVKSAASSKKKNCNGKIHISSIFVLFFCQVS
FVSCIPVAFPTGDAISLSHSVVMYACNKNVDLAIQHGRKRPPGSMLPQTKSALISYEGQR
KTATCSSLRLSIFTPNVLMISKHADGSLNQWAVSFAEDSAFSTVLSVSHKSRYCGHRFHL
NDLACHSLLPLLLTTSHHNALKTPEVDTIRAQDTLFPSVFDSTSQPHRSIQVSQDPNAIY
SELILWRVDPVGALSLSGGVSELARINSLHASAFSNVAWLPTLIPSSCLGETACFYCNSP
SACFVASDGHSLRLYQAVIEAKKLLSELSNPEISKYVGEVFNIISHQSTAKPGCIIELDT
ITEFQGKETQLLHVFEENLIFGNERTEDIEETSNAPSGIFTVEKMWQIFLLFFHCLNQQY
LLCFCFLLVSGQPTFSARFFLVVVELTPTGRSLLHMWHLQLTARPVILEKEVATAFTMNS
SEFTFDMFGSPLTPVMKSKPRTSNLQSTCRLNLKAHRVYSQELALPEGVEAITVTPSAGH
LSSSCSLPAGRVPYLLATSCSDGKVRFWRCNVTSTLSCTKDNFLYQWEEWPLLVEETHPN
SSVISVPGRPVKVSCCHTGRIAVAYRKTPTSPRNSTSQLHSRLLLTSPPTMTSSPNVRQS
SSYLNAAMTLGHGSNFTSRFNPASREPTVHIGIFQCESTGGSQWILEQTIVLDKVDPTVN
HGNSNSTAGSADIPHIMNLMPNEHCQGLARNNLVHLDWVSQENGSHILTVGIGTKIFMYG
RLSGKPPELCLTPDTSRDRNSSCLVLLRSVDLVSSVEGSLPIPVSLSWVRDGILVVGMDC
EMHVYSQWQPPAPAKASAQDTDISSSFSSIISAVKQSQEDGTGQGSLRSLPRRAVTRSMM
SLAQKLSGKKTAYDLPVEMEDSGLFEAAQQLFPTLPQYHPVQLLELMDLGKVHRAKAILS
HLVKCIAGEIVTLKDSTAGPDKRMRSRTISAGGSTLAKMFTKAEKSASDYTEISSIPPLP
LYALVAADEDISHDKVDTVSGDSGHDSSHTDTYDELFKTISLADLDPLDSDQVETGSKVI
DLSQYCPTYFGPEHAQVLSSHLLHSSLPGLTRMEQMSLMALADTIATTSTDLDSQGKSKG
GETLDECGLKFLLAVRLHTFLSTSLPPAHRAQLLRQGLSTCHYAWAFHSEAEEELLNMLP
ALQKEETTWPELRSMGVGWWLRSTNKLRRCIEKVARTSVQRNNDPLDAAIFYLAMKKRAV
VWGLYRSQKNAKMTAFFRNNFSEDRWRKAALKNAFSLLGKQRFQHSAAFFLLAGSLKDAV
CLEKMQDLQLALVISRLYESEFETASTYKKILQRHVLGQDKQVLLVLWQTSETTHKDPFL
RSIAYWVLEDYSKALDTLLEQPRNNPYGSAVSTCNPEVFNFYTYLRTHPLLLRRYFASSD
KTNVGLTAEGRRADSISLEERRLFFTAAYAHLQAGCPMLALEVLSKMPRVCKRSISPSHK
NAGVSSNLSIGSRNQQTSDSDWSHTALNGYESDSHSISNSRSDSVLSFDWSQPSLTLPDE
SLELKWDSDKDDDEEDNREAEDESENNQSRRNAESSEMFQETHDSMSTVLVMGEDNEDSD
DFITPSNDILAAQLKFTACLKIMTNELRTLSTGYELEGGKLRYQLCQWLEREVVALQRCC
SYKPCLPELSLQDEEQAGSPYDIQRSRRHWLQSNQPLLRMFLSYCSLHGSHGGGLASVRM
ELILLLQESNQDDSIQSGMDPCCQQASFPLLMACTANVKTVVANPIVYLTNLTHDILQTI
IALDSPPHPDVVNNEIFVMHTLAASLSACIYQCLCDGHTHSHVNNFTGTVYQSVLLSQKQ
HGRTFSMEESVQPNTSPAQWPGIASLCRLLSSAGEENQPGLAVLLCEILTAVFLSLFVHG
LATHSSNELFRIVGHPLNSKLWVTVFGGGAQIPVVEKANSHTGTPPPGTPASPGSSDRTS
KRFRLLSSRSGSRGESGIEEEGPSSPKSQPAVEQEATTILKERFIHPDLSIWDYLVTKPL
LPPSESRIEYDSEESHSSQDEDDDDDYTDAFDPHVPQREHSNHNSYSWCLMRLTMVQLVL
VNLRSFFPMAGYDLLDLPVCSPLCHAVLKTLQRWEQVLQKRLQLFGGPPPKYISTPLQDE
APGPALLRHKALYEPSNTPFRTSHPSALPVKRLWQFLVKQEEVQETFIRYIFTKKRDPNE
IESDPGFPGGKARIIHKESDIITAFAINKANRNCLVMASTHDIQELDVSSILATQILTWI
DDDEVETKGVGGDDFLVVHTRDDCAALHGTTPYTHSNLGTPINMPWLGGAQTGRGASVMI
KRNINNVRRMTSHPTLPYYLTGAQDGSVRMFEWGHSQQILCFRSPGNTRVTRIRFNHQGN
KFGIVDADGALSLWQTNTSGNTPKPYLTLQCHNKTAHDFVFVGSSSLIATAGLSTDNRNV
CLWDTLVPPVNSLVHAFCCHDSGATVLATAPRHQLLITGGKKGWISMLDLPHKHQRQSFQ
AHDSPVKALAVEPTEDCFISGSAEGNIRVWSLASQGPLYTFPNEHARQSLFRNLGTGVMQ
IEVGPADHIFSCGADGTMKMRILPNRFSVAHSNDQENLKNNVKFYI
NT seq
8598 nt
NT seq
+upstream
nt +downstream
nt
gcctacgcttcaggctgtgacgtggtgattttgggcagtgatttcgagcggctgcagatt
atcccaggcgccaaacacggcaacattcaagttggctgtgttgattgctcattacagggt
ggacagattgcagcttcctatggaagcacagtgtgtatctttgagcctgttcagcaacaa
gatcaaaaagacccatctctgcctaaagtgaattgccagtggcagaagactggacagttt
gtcttaaagtctgtggtgcgcaacctagcatggcaccccacaggcagcagtcttttaacc
ggctccaatagcctgcagctgtggtctgttgtcagtgaggatgatgaagcagaagaggaa
aagcagacaaaaaagataagaggcaactccggctgtgcctggagttgcatctggcacagc
aagacagcctccccaattagtttaatgaagttctcacctgatggagaattttttgctact
gctggacaggacgactgcctggttaaggtgtggtacagcaccagtaagtggaggtcaggt
gtctccggcctcttcacacctccagaagacagtatcactgtccagggagagctcagcttt
tcctttatctacctcgcccatcctcgctctgtcacgggcttctcatggaggaagaccagc
aaatacatgccaagaggtgcagtgtgtaatgttttgcttaccagctgtaaggacagcgtg
tgccgtctctgggccgagactctccttcctggtgatagccatctctctggttaccatagc
aacctcactgccagccagcacattgacacagtcaaaagtgctgcctcctccaagaaaaaa
aactgcaatggaaaaattcacatatcatcaatatttgttttgtttttctgtcaggtgtcc
tttgtgtcctgtataccagtggcatttcctacaggagacgcgatctccctgagccacagc
gtggtgatgtatgcctgcaacaagaatgtggatctggctatccagcatggcagaaagcga
ccacctgggagcatgttgcctcaaaccaaatctgctctaataagctacgaagggcaaagg
aaaactgcaacctgcagcagtcttcgcctaagcattttcacccccaacgttctcatgatt
tccaaacatgcagatggatccctgaaccagtgggcagtcagctttgcagaggactctgct
ttctcgactgtgcttagtgtctcgcacaagtcacggtactgcggtcatcgcttccatctc
aatgatctggcctgtcactcattacttcctcttctcctcaccacctcacaccacaatgct
ttgaagactccagaagtagacaccatccgggctcaggataccctttttccaagtgttttt
gattcaacttctcagcctcacagatcaatccaagtatcccaggatcccaacgccatctac
agcgagcttatattatggcgggttgacccggtcggcgctctgtcactatcaggaggagtt
tcggagcttgcacgaatcaattccctccacgcatcagccttctctaatgtggcctggttg
cccacactcatccccagcagctgtttaggtgagactgcttgtttctattgcaattctccc
agtgcttgttttgtggcgagtgatggacactcgctaaggttgtatcaggctgttattgaa
gccaagaaactcttgagtgaactatccaaccccgagatatctaaatatgttggggaggtc
ttcaacatcatcagtcatcaatccacagccaaacctgggtgtattatagagttggatacc
attactgaatttcaggggaaggagacccagctcctgcatgtttttgaggagaatcttatc
tttggtaatgagagaacagaggacatagaggaaacctccaatgctccctctggtatattt
actgtagaaaagatgtggcaaatttttcttcttttttttcattgccttaatcagcagtat
cttttgtgtttttgtttccttctagtctctggtcagccaaccttctctgcacgttttttt
cttgtggtggttgaattgaccccaacaggtcgctccctcctccacatgtggcatctccag
ctcactgctcggcctgtcatcctggagaaagaagtcgccacagcttttacgatgaacagc
tcagagtttacctttgacatgtttggttctccactaacaccagtcatgaaaagcaaaccc
cgcacgtccaacctacaaagcacctgtcgcctaaacctcaaagcacacagagtgtacagc
caagagctggctctgccagaaggagtggaagcaatcactgtaacgccttcagcaggtcac
ctgagctcgtcgtgttctctgcctgctggccgcgtaccttacctccttgctacttcctgt
tctgatggaaaggtgcgtttttggagatgtaatgtgacttcaacattgtcttgcacaaag
gacaacttcctgtatcagtgggaggagtggcctctcctggtggaggaaacccacccgaac
agcagtgttataagtgtgccaggtcgccccgtaaaggtgagctgttgtcacaccggacgg
attgcagttgcctacaggaagactccaacttcaccgcggaattcaacatctcaacttcac
tctcgtcttctgctgacttctcctcccaccatgacgtcttccccgaatgtgcgtcagagc
agctcctacctgaatgcagccatgactttaggacatggctcaaatttcacgtcaaggttc
aacccagccagcagggagccaacagtccacattggtatcttccagtgtgagtctactggt
ggttctcagtggattttagagcagaccatagttttggacaaagtggatcccactgttaac
catggcaatagcaatagcacagctggaagtgctgacattccacatatcatgaatttgatg
cccaacgaacattgtcagggtttagctagaaataacctggttcatttggactgggtctct
caagagaatggatcacatatccttacggttgggattggtactaagatttttatgtacgga
cgtctttctgggaagcctccagaactttgcttaacgcctgacaccagcagagaccgaaac
tcatcatgtctcgtgctgcttcggtcagttgatctagtttcctctgttgaaggctcactg
cccattccagtttctctctcctgggtccgagatggcatcttggttgtaggtatggattgt
gagatgcacgtttactcccagtggcagccaccagcaccagcgaaagccagtgcccaagac
acagacatatccagcagcttttcctccataatctcagctgtaaaacagagccaggaagat
ggcaccggtcagggttctttacggagccttcccagaagggcagtgacacgatcaatgatg
agcctggctcagaaacttagtgggaaaaaaactgcttatgacctgcctgtagagatggag
gattccggcctttttgaagcagctcagcagctctttcccactttgccccaatatcatcct
gtacagttactggagctcatggatcttgggaaggtgcaccgtgccaaagccatcttgtct
catctcgtgaaatgcattgctggagaaattgtgacacttaaagacagtacagccggtcct
gataaacgcatgcgctctcgaaccatcagcgctggaggcagcacgctcgcaaagatgttt
accaaagcagagaagtccgcttcggactacacagagatcagctccatccctccacttcct
ctgtatgcacttgtagcagctgatgaggatatttcacacgataaggtggacactgtgagt
ggagacagcggccatgattccagccataccgacacatacgatgaactctttaagacaatc
agcctggcagatttggatcctctagacagtgatcaagtggaaactgggagcaaggtcatt
gacttgtcccagtactgtcctacctactttggtccagaacatgcccaagttctgtccagt
cacctccttcattcgagtttgccgggtttaactcgtatggagcagatgtctctcatggca
ttggccgacacgattgctaccacgagcacagacttggacagccaaggcaaaagcaaaggt
ggggagacactggatgagtgtggcctaaagttcctgctggctgttagactccatacattc
ctctccacctccctgccaccagcacacagagcgcagctgctacgacaaggtctgtcaaca
tgtcattatgcctgggcctttcattctgaagctgaggaggagctattgaatatgctgcct
gctctacagaaggaggagaccacctggcctgagctgcgttccatgggtgttggttggtgg
ctgcgtagcaccaacaaactacgtaggtgtattgagaaggttgcccggacttctgtacag
cgaaacaatgatcctttggatgctgctatattttacctagcaatgaaaaagagggcagtg
gtatggggattatacagatctcagaagaatgctaaaatgacagccttctttcggaacaac
ttcagtgaggaccgatggaggaaagcagcgctgaaaaatgcattttccctactgggaaag
cagcgcttccaacactctgcagccttctttcttcttgctggttcccttaaggatgctgtg
tgcttggagaaaatgcaggatctgcagctggccctggtgatctcaagattgtatgagtct
gagtttgagacagcatctacatacaaaaagatccttcagagacatgtattaggacaagat
aaacaggtgctgttggttttatggcagaccagtgaaactactcataaagatccgtttttg
cggagtattgcatactgggtgctggaggactacagcaaggctttggacactctgcttgaa
cagcctcgtaataacccctatggttctgctgtatcgacatgcaatcctgaggtttttaac
ttttacacctaccttcgaacacacccacttctccttcgacgctactttgcctcctcggat
aagactaatgttggcctcacggctgagggtcgcagggctgactccattagcctggaagag
agaaggctgttcttcacagctgcgtatgcacacctgcaagctggctgtcccatgctagca
ctcgaggtcctgtcgaagatgcccagagtctgcaagcgttccatttcccccagccacaag
aacgcaggcgtctcatcaaatctcagtattgggagcaggaaccaacagacgtctgactcg
gattggtctcatactgctttgaatggctatgagtctgacagtcacagcatatccaacagc
cggtctgattcagtgttaagttttgactggagccagccttcgctgacgctcccggatgag
tccctggagctaaaatgggacagtgacaaagatgacgatgaagaggataatcgagaggct
gaggatgaaagtgaaaataatcagagtagaagaaatgcagagagcagtgaaatgttccag
gagacacatgattccatgtcaacagtgctggtgatgggggaggataatgaggacagcgat
gacttcataacaccctctaatgatattctggcagctcagttaaagtttactgcatgcttg
aaaattatgaccaatgagctccgcacactgtcaacagggtacgaattagagggaggaaag
ctacgttaccagctctgtcagtggttagaacgagaggtggtggctctccagcgttgttgc
agttacaagccttgcttaccagaactgtctcttcaggatgaggaacaggctgggagtcca
tatgacatccaaagaagcagaagacactggctgcagagcaaccagcccctgctgagaatg
tttctgagttactgcagcttgcatggctcacatggtggaggactggcttctgtgcgaatg
gagctcatattactgctccaagagtctaaccaggatgactccattcaatcaggaatggac
ccctgttgtcagcaagcctcctttccactcctgatggcatgcacagccaacgtcaaaaca
gtggtggctaaccccatcgtctacttgaccaacctgactcatgacatcttgcagaccatc
attgcgcttgactctcctcctcaccctgatgttgttaataatgagatctttgtgatgcat
accctggccgcctccttgtcagcttgtatttatcagtgtctatgtgacggacacacccac
agccatgtaaacaattttacgggaactgtgtatcagagtgtgttgctgtctcagaagcag
cacggcagaaccttcagcatggaagagtctgtccagcccaacacctctcctgctcagtgg
ccaggtattgcatctctctgtcgcctgttgagctctgcaggtgaagagaaccagccgggc
ttggctgtgctgctctgtgagattctgactgccgtcttcctcagtctgtttgttcacggc
ttggcaactcactccagcaacgagctgttccgcatcgtaggccaccccctcaacagcaag
ctctgggtgacagtgtttggaggtggtgctcagattcctgttgtggagaaggccaacagt
cacacaggaacacccccgccaggcaccccagcttcccccggctcctccgacaggacttca
aaacgattcagactcctgtcatcacgtagtggatccaggggggagtcaggaatagaggag
gaaggcccctccagtccaaaatctcaaccagcggtggagcaagaagcaactaccatattg
aaagaaaggttcatccatccagacctcagcatttgggattacctagtcaccaagcctttg
ctgcctccatcagaaagcagaattgagtatgattctgaggagagccacagtagtcaagat
gaagatgacgacgatgactacacagacgcattcgacccccacgtgccacaaagagagcac
tcaaatcacaattcttacagttggtgtttgatgcgtttgacaatggttcagctggtgttg
gtcaacctgagatcgttcttcccaatggcaggatatgatctgttggatctgcctgtgtgc
tcccctctgtgtcacgctgtgttaaaaacactgcaacgctgggagcaggtgctgcagaaa
aggctgcagctgtttggaggccctcctcctaaatacatctcaactccccttcaggatgaa
gcgcctggccctgccctgctgaggcacaaggccctgtatgaaccctcaaacaccccattc
aggaccagccatccttccgcgctgccggtgaagcggctctggcagtttctggtaaagcag
gaagaagtgcaggagacattcattagatacatctttacgaagaaacgggacccaaatgag
attgagtcagacccaggcttcccaggaggaaaagcacgcatcatacacaaggaatcggac
atcatcacagcatttgccatcaacaaggcaaatcggaattgtttagtcatggcctccacc
catgacattcaagagttggatgtgtcatccatcttggccactcagatcttgacgtggatt
gatgacgatgaggttgaaaccaaaggtgtcggcggtgacgattttctggtcgtccacacg
cgtgacgactgtgctgccctccacggcacaacaccgtacacccacagtaacctcgggacg
cccatcaacatgccgtggctcggaggggcacagacgggccgcggcgcatctgtgatgata
aagagaaacatcaacaatgtgaggaggatgacgtcccaccccaccctgccttactacttg
acgggagctcaggatggtagcgtgaggatgtttgagtggggtcactcccaacaaatcctc
tgcttcagaagtccaggaaacaccagagtcaccaggatcagattcaaccaccagggaaac
aagtttggcatcgttgatgctgacggagcgttgagcctctggcagaccaacacgagcggg
aacacgcccaaaccctacctgacgttgcagtgccacaacaagacggctcatgacttcgtc
ttcgtgggctcctcctcgctcattgccaccgcgggtctatcgacagacaaccggaacgtg
tgtctttgggacactctggtgcctcctgttaacagccttgttcacgctttctgctgtcat
gactctggggccacggtgctcgccacggccccccggcaccagctcctgattactggtgga
aagaagggctggatcagcatgctggacctcccccacaagcaccagcgccaaagcttccag
gcccacgactcaccggtgaaagcgctggccgtggaaccaaccgaggactgcttcatcagc
ggatcagccgagggcaacatcagggtctggagcctcgccagccagggcccgctctacacc
ttccccaacgagcacgcccgccagtcgctgttccggaacctgggcacgggagtcatgcag
atcgaggtgggaccagccgatcacatcttctcctgcggcgccgacggaaccatgaaaatg
aggatcctccccaaccgcttcagcgttgcccatagcaacgaccaggaaaacctcaagaac
aatgtcaagttctacata
DBGET
integrated database retrieval system
