Tetraodon nigroviridis (spotted green pufferfish): GSTEN00031128G001
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Entry
GSTEN00031128G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K16498
protocadherin delta 1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
GSTEN00031128G001
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tng01009
]
GSTEN00031128G001
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tng04515
]
GSTEN00031128G001
Protein phosphatases and associated proteins [BR:
tng01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
GSTEN00031128G001
Cell adhesion molecules [BR:
tng04515
]
Cadherins
Protocadherins
GSTEN00031128G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
TMEM154
DUF6249
AP3D1
Motif
Other DBs
NCBI-ProteinID:
CAG09728
UniProt:
Q4RPF4
LinkDB
All DBs
Position
1
AA seq
1210 aa
AA seq
DB search
MDSASRLAVLAGLLACLLLLCLAQERDYTVKEEQPENVRIGNLRKDLDLNLDPNIRLSSP
LQFKPVYKTGDVPLRCYYEIEVAVLPDEIFRLVKIRFLIEDVNDNAPLFQSTVINISIPE
NTAINTRYPVPSAFDPDVGINGIQHYELVKSVSEFGLDIIETPEGDKWPQLIVQQNLDRE
QKDTYVMKIKVEDGGNPPKSSTAILQVTISDVNDNRPIFKDSELEVTVPENAPMGTSVAQ
LHATDADLGSNAQIHFTFSNQISAGTKRHFSIDGSTGLITVKQSLDRELTPVHKLIVLAS
DGSSTPSRATVIVNVTDVNDNVPTIDTRYIINLVNGTVLLSENAPLNTKIALITVTDKDA
DLYGKVACYTDHDVPFRLKPVFNDQFLLETAAPLDYETTREYAIKIVASDRGTPPLNTSA
MVLIKIKDENDNVPIFPQPEIQLSIPENNDPSTQLIKLSATDADSEHNAEIIYTLGPDAP
EGFNVDRRSGVLSVGKRLDREKQDRYAFTVIAKDNGSTSLQSNVTVKLIVQDLNDNSPAF
THPEYNFYVPENLPLFGTVGLITVTDADSGENAVVTLSILNGKDNFIIDPQTGVIKPNIT
FDREQQSSYTFMVKAVDGGQPPSSSYAKVTINVVDVNDNRPVFVIPSSNYSYDLVRTNAS
PGAVVTRVYAIDNDTGMNAELQYSIISSIIITSRVSPRGLFAIDKSTGNITLQEKIVAAD
QGLHRLVVKVRDLGQPESLHAITLVHLFVNDTVSNSTFIQEQLRKSMETPLDRNIGDSEI
TAQANGYVIVVIAIIAGTMTVILVIFVTALVRCRQTPRHKVVQKGKQSGEWVSPNQENRQ
IKKKKKKRKKRSPKSLLLNFVTIDESKPDDPTHEHVNGTLDLPVELEEQTMGKYNWATTP
TTFKPDSPDLAKHYKSASPQPTFQIKPETPVAPKKHHVIQELPLDNTFVVGCDSLSKCSS
TSSDPYSVSECGCQGGFKTAGQITTRQVIHDFLFKPTHSRPHSLSHCCCVVGDGSGRETA
LKPPHYGTLCGTAQIQCSPRCELGIKGKEQIDIDILRVFFVSHFCQNLSPTLENSFTSPP
SICPHKLLAPVSTTSEIGECSLEQEEEACQLSKITSINTQRRVTFHLPDGSQESCSDSGL
GDPEPSSMASTGQALPLSFPQEEYYEQTSPNSRTEGDGNSDPESSECRNSTLLGPQGNKL
ISISPWFCFH
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atggactcagcaagtcggttagccgtactggcgggcttgctcgcctgcctgctcttgctg
tgcctggctcaggagagagactacacagtcaaggaggagcagccagaaaacgtccgcatt
ggcaatctgcgcaaggatctagacctcaacctggaccccaacatcaggctgtcttcgccg
ctgcagtttaaacctgtgtacaagacgggcgatgtgcctttgcgttgctactacgagatc
gaagtggccgtcctgcctgatgagatctttcgattggtcaagatccgcttcttgattgag
gatgtaaacgacaatgcgcctctttttcagtccacggtaataaatatttccatcccagag
aatacagcaatcaacactcgatacccagtgccctcggcgtttgaccccgatgtgggaatc
aatggaattcagcactatgaacttgtcaagagtgtcagtgagtttggcctggacatcatc
gagacacccgaaggtgacaaatggccgcaacttatcgttcagcaaaatctagatcgtgaa
cagaaggacacctatgtcatgaagatcaaggtggaagacggcggcaaccctcccaagtcc
agcaccgccatcctccaggtcactatctctgacgtcaacgacaatcggcccatcttcaag
gacagtgagctggaggtcaccgtgcctgagaatgccccaatggggacgtctgttgctcag
cttcatgccacagatgcagacctgggttccaatgcgcaaattcactttacctttagcaac
cagatttctgctgggaccaagcgacacttttctattgatggctccacaggactgattacc
gtgaagcagtcgctggacagggagctgactccggtccataaactcattgtcctcgctagc
gatggtagctccaccccctccagagccaccgtgattgtgaacgtaacagacgtcaatgac
aacgttcccaccattgacacccgctacattatcaaccttgtgaacgggaccgttctgctg
tccgagaatgcacctctcaacacaaaaatagctctgattactgttactgacaaagacgcg
gatctttacggaaaagtggcctgctacactgaccacgatgttcctttccggctgaagcct
gtctttaatgatcagttcttactggagacggccgcccccctagattatgagacgactcga
gaatatgcaattaagatagtggcttcagatagaggaacgcctcctttgaacacttcagcg
atggttttaattaaaatcaaagatgagaacgacaatgtgcccatcttcccccagcctgaa
atccagctctccataccagagaacaatgacccttccacacagctaataaagctcagtgcc
actgatgcagacagcgaacataatgcagagattatttataccctcggccctgatgcacct
gaaggttttaacgtagacagacgttcgggagtcctctctgttggtaaacgcctggacaga
gagaaacaggacagatacgcattcacagtcatcgctaaggacaacggctccacatccctg
cagagcaatgttacggtcaagctaattgtgcaggacctcaatgacaacagcccggctttc
acacaccccgagtacaacttctacgtgcctgaaaacctgcctctttttggaactgtgggc
ttgatcacggtgacagatgcagattcaggagagaatgccgttgtgactctgtccatattg
aatggaaaagataatttcatcatcgacccccaaaccggagtgatcaaacccaacatcacc
tttgacagggagcagcaaagctcctacacattcatggtcaaggcagtggatggagggcag
ccgcccagctcctcctacgccaaggtcactatcaatgttgttgatgtgaatgacaatcgg
cccgtgtttgttatcccctcttccaattactcgtatgacctggtgcggaccaacgccagc
cccggcgctgtggtaacaagagtttatgccattgacaatgacaccgggatgaatgctgag
ctgcagtacagcattatcagcagcatcatcatcacatctcgggtctcacctcgaggtctt
tttgccattgacaaatcaacgggtaacataacactacaggaaaaaattgtggcggccgat
caggggcttcacaggctggtagtcaaggtcagagacctaggccagcctgagtcattacac
gccattacacttgttcacttgtttgttaatgacactgtttcaaattctaccttcatccaa
gagcagctgcgaaaaagtatggagacgcccttggaccgtaatattggagacagtgagata
actgctcaagccaatggatatgtaattgttgtcatagctataatagcggggaccatgact
gtcatcttagtgatatttgtgactgcattggtgcgctgtcggcagacacccagacacaaa
gtggtacagaagggcaagcagagcggcgagtgggtgtcacccaaccaagaaaacaggcag
atcaagaaaaagaagaagaaaaggaagaagcgatccccaaagagccttctgctgaacttt
gtgaccatagatgaatccaagcctgatgaccccacccacgagcatgttaacggaacactg
gacctccctgtggagctagaggagcaaacaatggggaaatacaattgggcaaccacacct
accactttcaaacctgacagcccagatttagccaagcattacaagtcggcgtcccctcag
ccaacatttcaaatcaaacccgagactccagtggccccaaagaaacaccacgtgatccag
gagctccctttggacaacacatttgtcgtgggctgtgactcgctttccaagtgctcatcg
actagctccgacccatacagcgtctcagagtgtggctgtcaagggggattcaagaccgcg
ggccaaatcactactcgacaggtaattcatgactttctttttaaacccacccacagtcgt
ccccactcactctcacactgctgctgcgtggtaggtgatgggagtgggagggagacggca
ctgaaaccaccacactatggcacactctgtggcacagcgcagatccagtgcagcccgaga
tgtgagctgggcatcaagggcaaggagcagatcgacatagatatcctacgtgtgttcttc
gtgtcacatttctgtcagaacctgagcccgacgctggagaactcttttacctcgccgccg
tccatttgtccccataagctcctggctcctgtaagtaccacttcagagattggagagtgt
agtctggagcaagaggaggaggcctgtcaactcagcaagataacgtccattaatacccag
cggcgtgtgacgttccatctcccagacggatcccaggagagctgcagcgacagcgggctg
ggagacccggagccgagcagcatggcgagcaccggccaggcccttccccttagcttcccc
caggaggagtactacgagcaaacatctcccaacagccgcaccgagggagacggaaactcc
gaccccgaatcaagtgagtgccgcaactccactctgctcgggcctcagggaaacaagctc
atttctatttctccttggttctgttttcactga
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integrated database retrieval system
