Tetraodon nigroviridis (spotted green pufferfish): GSTEN00031166G001
Help
Entry
GSTEN00031166G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K13217
pre-mRNA-processing factor 39
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tng03041
]
GSTEN00031166G001
Spliceosome [BR:
tng03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
GSTEN00031166G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_PRP39_N
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
TPR_11
TPR_2
TPR_12
TPR_MalT
TPR_1
HrpB1_HrpK
FUSC
TPR_16
ARM_TT21_N
COX5A
ARM_TT21_4th
Iml2-TPR_39
GAT
HH_EMRA
Motif
Other DBs
NCBI-ProteinID:
CAG09750
UniProt:
Q4RPD2
LinkDB
All DBs
Position
1
AA seq
509 aa
AA seq
DB search
QGLQGIPLSVDLWIHYINLLLGTLDMNLPESPPRIRSVFEDAVRAAGLDFHSDRLWDLYV
EWEKEQGNMRKATAVLDRVLKVPTQLYNTHYDKFKEHLNSNEPKEVLSTEEYEELRAACR
QSQRAKRAEQSQEETQEGPPGEEKPPTPEGPDTEELKQKIREKVLLQRDKVYQENEEQVR
KRWHFEDAIKRPYFHVKPLDHLQLQAWHSYLDWELAELNKDPSQASQEEGPGRRDDSRVR
VLFERCLIACALYEEFWTRYARYLESHNVEEARAVFKRACEIHLTRRPNICMQWATFEER
HNNLAEARRVLAAIESRVPGLAVVRLRRVALERRAGQLDQAVALLQEAVAESKEKPTLHA
FYSIKLARLLLKLARNPSKARKVLQEALEINPNNDKLHINLLELEVSGDTWASDEVVQEC
VTRALAAPLTPQTKLLLSQRGLQFVEDYSSSIKSNPSTAAMATRTPGTTTRAITPAARGG
SRLGQQDWPQDAVLSDMKGRPSGAAARWS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
cagggtctgcaagggatcccgctgagcgtggacctgtggatccactacatcaatctgctg
ctgggaactctggacatgaacctgcctgagtctcccccgcggatccgcagcgtgtttgag
gacgccgtccgggcagcaggtctggacttccactcagacaggctgtgggatctctacgtt
gagtgggagaaggagcagggcaacatgaggaaggccacagccgtgctggacagagtcctc
aaagttcccacccaactctacaacacccactatgacaagttcaaagaacacctgaacagc
aacgagccgaaggaggtgctctccacggaggagtacgaggagctgagggcggcctgccga
cagagtcagagggccaaacgtgctgaacagtcacaggaggagacgcaggaggggcccccg
ggggaggaaaagccccccacgcctgagggcccggacacggaggaattgaagcagaagatc
agggaaaaagtgctgcttcagagggataaagtttaccaagaaaacgaggagcaggtccgc
aaacgatggcactttgaagacgctatcaagcggccgtacttccacgtgaagcccctggac
catctccagctgcaggcctggcactcttacctggactgggagcttgcggagctcaacaaa
gaccccagccaggccagtcaagaggagggccccggtcgccgtgacgactccagggtccgc
gttctcttcgagcgctgcttgatcgcctgtgccctgtacgaggagttctggaccaggtac
gctcgctacctggaatcacacaacgtggaggaggcgcgagcggttttcaaacgagcctgc
gagatccacctgacgcgcagacccaacatctgcatgcagtgggccaccttcgaggagagg
cacaataacttggccgaggctcggcgagtgctggcggccatcgagagcagggtgcccggg
ttggcggtggtgcgtctccgcagggtggctttggagcgacgagccggtcagctggaccag
gcggtggccctgctgcaggaggctgtggcggaatccaaggagaagcccaccttacacgcc
ttctactccataaagctggcccgcctgctgctgaaactggccaggaaccccagcaaagcc
cggaaggtcctacaggaggccttggaaatcaacccgaataatgataaactacatattaac
ctgttggagctggaggtgtcgggggacacctgggcctctgatgaggtggtgcaggagtgt
gtcacacgagccctggcggctccgctcaccccgcaaaccaaactcctgctgtcccagcga
ggcctccagtttgttgaggactacagcagctccatcaagagcaaccccagtacggcagct
atggctaccagaacacctggaactacaaccagggctattaccccagcagctagagggggc
agcaggctggggcagcaggattggccacaggacgcagttttatcagacatgaagggacgt
cccagcggagcagccgcccgctggtcctga
DBGET
integrated database retrieval system
