Tetraodon nigroviridis (spotted green pufferfish): GSTEN00031242G001
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Entry
GSTEN00031242G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tng03000
]
GSTEN00031242G001
Transcription factors [BR:
tng03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
GSTEN00031242G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-ProteinID:
CAG09811
UniProt:
Q4RP71
LinkDB
All DBs
Position
1
AA seq
295 aa
AA seq
DB search
METEIKTPLPQSNSGSAPGGKNNSSNEDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEI
SKRLGADWKLLTDAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYSLPGGL
LTPGANPVNNSVSVGQRMDGYAHMNGWTNSAYSLMQDQLAYPQHHNMNSPQIQQMHRYEM
AGLQYPMMSSAQTYMNAASTYSMSPAYTQQTSSAMGLSSMASVCKTEPSSPPPAITSHSQ
RACLGDLRDMISMYLPPGGDSAEHSSLQSSRLHSVHPHYQSAGTGVNGTLPLTHI
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccgagatcaagaccccgctcccgcagtccaattcgggctcggcaccgggcggt
aagaacaacagcagcaacgaggatcgggtgaagcgccccatgaacgccttcatggtctgg
tcccggggacagcggaggaagatggcacaagaaaatcccaaaatgcacaactcagaaatc
agcaagcgactcggcgcagactggaaacttctgaccgacgccgagaagaggccattcatc
gacgaggccaagcgtcttcgcgctatgcacatgaaggaacacccggattataaataccgt
ccccgcagaaagaccaagaccttgctcaagaaagacaagtactctttgcccgggggactg
ctgacgcctggagccaaccccgtcaacaactcggtgtcggtgggtcagcgcatggatggt
tacgcgcacatgaacggctggacaaacagcgcgtactccctcatgcaggaccagctggcc
taccctcaacatcacaacatgaacagcccccagatccagcagatgcaccggtacgagatg
gcagggctccagtaccccatgatgtcctcggcccagacctacatgaacgcggcgtctact
tacagcatgtccccggcgtacacgcagcagacctccagcgccatgggcctcagctccatg
gcttccgtgtgcaagaccgagccgagctcaccgccaccggccatcacgtctcactctcag
cgggcgtgtttgggggacctgagggatatgatcagcatgtatctcccccccggcggggac
agcgcggagcactcctccctgcagagcagccggttacacagcgtccatccgcactatcag
agcgcagggactggcgtcaatggcacgctacctctcactcacatctga
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