Tetraodon nigroviridis (spotted green pufferfish): GSTEN00031367G001
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Entry
GSTEN00031367G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03082
ATP-dependent chromatin remodeling
tng03083
Polycomb repressive complex
tng04110
Cell cycle
tng04330
Notch signaling pathway
tng04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
GSTEN00031367G001
03083 Polycomb repressive complex
GSTEN00031367G001
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
GSTEN00031367G001
04350 TGF-beta signaling pathway
GSTEN00031367G001
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
GSTEN00031367G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tng03036
]
GSTEN00031367G001
Enzymes [BR:
tng01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
GSTEN00031367G001
Chromosome and associated proteins [BR:
tng03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
GSTEN00031367G001
HDAC complexes
Sin3A-HDAC complex
GSTEN00031367G001
BRAF-HDAC complex
GSTEN00031367G001
REST complex
GSTEN00031367G001
SHIP complex
GSTEN00031367G001
MiDAC complex
GSTEN00031367G001
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
GSTEN00031367G001
Heterochromatin formation proteins
Other heterochromatin formation proteins
GSTEN00031367G001
Chromatin remodeling factors
NuRD complex
GSTEN00031367G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-ProteinID:
CAG09908
UniProt:
Q4RNX4
LinkDB
All DBs
Position
10
AA seq
486 aa
AA seq
DB search
MALTSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
NGEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSVGGSVA
GAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEA
IFKPARARLLLSVTEVVPRADNGQGDGDVPAQCGGSPVRSDSLSGDRLGCFNLTIKGHAK
CVEYMKSFNLPLLMLGGGGYTIRNVARCWTYETAVALDASIPNELPYNDYFEYFGPDFKL
HISPSNMTNQNTNDYLEKIKQRLFENLRMLPHAPGVQMQAIPEDAVQEDSGDEEEEDPNK
RISIRAHDKRIACEEEFSDSEDEGEGGRRNSASFKKAKRAKTEGDKEGEEKEKKEVKEEE
KVPEEE
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttacttcccaaggaaccaagaaaaaagtttgctactactatgatggtgacgtt
ggaaattattactacggtcagggacatcccatgaagccccaccgaatccgcatgactcac
aacctcctgctcaactatggcctctacagaaagatggagatttatcgtccgcataaagct
aacggagaggagatgaccaagtaccacagcgacgattacatcaagttcctgcgctccatc
cgaccggacaacatgtcagagtacagcaagcagatgcagagatttaacgtgggagaggac
tgtccggtgttcgacggcctgtttgagttctgccagctgtctgtagggggctcggttgct
ggcgctgtcaagttgaacaaacagcagaccgacatcgccatcaactgggctggaggcctt
caccacgccaagaaatccgaggcctcgggattttgctacgtcaacgacatagttctggcc
atcctggaattactgaaatatcaccagcgagtcctctacatagacatcgacatccaccac
ggcgatggcgtggaggaggctttttacaccaccgaccgcgtgatgacggtttcattccac
aagtacggagagtatttccccggcacaggtgacctgagggacatcggcgcagggaagggc
aaatactacgcggtgaactacccgctgagggacgggatcgacgacgagtcctacgaggcc
atcttcaaacctgcacgggcgcgcctgcttctgagcgtgaccgaggttgttccccgtgca
gataatggccaaggtgatggagatgtaccagcccagtgcggtggttctccagtgcggagt
gattccctgtcaggagacaggctgggatgtttcaacctcaccattaaaggtcacgccaag
tgtgtggagtacatgaagagcttcaacctgccgctgctgatgctgggcgggggaggctac
accatccgcaacgtggcgcgctgctggacgtacgagaccgccgtggctctggatgcctcc
atccccaacgagcttccctacaacgactactttgagtactttggacccgacttcaagctg
cacatcagcccctctaacatgaccaaccagaacaccaacgactacctggagaaaatcaag
cagcgcctgtttgagaatctgcgcatgctgccccacgctcccggcgttcagatgcaggcc
atccccgaagacgccgtgcaggaggacagcggagacgaggaagaggaggaccccaacaag
cgcatctccatccgcgctcatgacaagaggatagcgtgcgaggaagagttctctgactcc
gaggacgaaggggaaggaggccgtagaaattcagccagcttcaagaaagccaagagagcc
aagacagaaggagacaaagagggagaagaaaaggagaagaaagaggtaaaagaagaggag
aaggtgccagaggaggag
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