Tetraodon nigroviridis (spotted green pufferfish): GSTEN00031373G001
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Entry
GSTEN00031373G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03013
Nucleocytoplasmic transport
tng03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GSTEN00031373G001
03015 mRNA surveillance pathway
GSTEN00031373G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tng03019
]
GSTEN00031373G001
03041 Spliceosome [BR:
tng03041
]
GSTEN00031373G001
Messenger RNA biogenesis [BR:
tng03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
GSTEN00031373G001
Spliceosome [BR:
tng03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
GSTEN00031373G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-ProteinID:
CAG09913
UniProt:
Q4RNW9
LinkDB
All DBs
Position
10
AA seq
780 aa
AA seq
DB search
QGTSAEQDNRFSNKQKKLLKQLKFAECLDKKVDMTKVNLEVIKPWITKRVNDILGFEDDV
VIEFIFNQLEEKHPDAKRRQINLTGFLNGKNAREFMKDLWPLLLSAQENIAGIPSAFLEQ
KKEEIRQRQIEQEKLATLKKVDENKKEKDARERAQSRSPRRRKTRSPSPRRRSPAKRERK
RSLSHSPRRKPSPAAAGSPPPLMQLSTKPVEQLAEPEVPGRATPEPVVQDTTRSYSPRRR
QSPRRRMSPRRRSPPRRGPTGSRHRHRRSPVRRRRSRSASSSGSSSSGSPSPKKAMKRVS
NTPPRKQGHQLDASVSPSAKDRRSPSPRGRRGRASASPPRSSGFKRKPERGDSSSDNVKA
RPSEGSESDEDKNGKGATTDSVQQRRQYRRQNQESSSDTGSSSSEDEGPNRPTSGPSARN
GEVRRRRSRTPSPRRRHRDASPRKRRSPSPGRRRRSPSPPRRRRSPSPRRRSPSPPPRRR
SPSPRRYSPPIQRRYSPSPLPPQKRRFSVSPVRRSPPMAKRRPSRSPKRRASPPQRRRTP
PSSQSPLRHRRSPVAARRSRDTRSPAAAASRLSPSPATRSHALRRSTSPQGRFEASGTSP
FNQRRKSPPHSGKPIRRVSRTPEPRSNPRPCPSPQPLRRASSRSVSPPPAAHKHPAAASA
SLSPPRSASASPPPAKKANSASGSRSPSKTSDVDGSGKKKKKKKEKKHKKDKKHKKHKKH
KKEKSGGAAAGEGQEVQPTEEDGDSRKDSESEADDGLDDLEKHLREKALRSMRKAQLSPS
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
cagggcacgagtgcggagcaagacaaccggttcagcaacaagcagaagaaactactgaaa
caactgaaatttgcagaatgtctggacaaaaaggttgacatgaccaaagtgaacctggaa
gtcatcaaaccttggattactaagcgagtgaacgacatcctaggattcgaggatgatgtt
gttatagagtttatatttaaccagcttgaggagaagcacccagatgccaagaggaggcag
atcaatctgacgggcttcttgaatggcaaaaatgctcgggagttcatgaaggacctgtgg
cccttgttactcagtgcgcaggagaacatagcaggcatcccttcagcttttctggaacag
aagaaagaggaaattagacaaagacagattgaacaggagaagctcgctacgctgaaaaag
gtcgatgaaaacaagaaagaaaaagacgcaagagagagggcccaatccagaagccccaga
agacgaaagacaaggtcaccatccccccggcgaaggtcgccggcaaagagggaacgaaag
cgcagcctgtcacactctcccaggcgcaaacccagtccagctgccgctgggtcaccacca
ccactgatgcagttgtccaccaaaccagtggagcagctggcagagccggaagtacctggg
agagccacaccggaaccagttgtccaggacactacgcggtcctattcccctcgaagaaga
cagagtcccagaaggagaatgtctcctcgtcgacggagccccccgagacgcgggccaacg
ggctccaggcacagacatagacgttctcctgtccgcaggaggcgctcccgctccgcttca
tcaagtggcagcagctcctctggctccccttctcctaaaaaggcaatgaaacgagtatca
aacacgccacctcgtaaacagggccatcagcttgacgcctccgtgagcccttcggccaaa
gacaggcggtcgccttcaccgcggggcaggaggggtcgagcatccgcgtcaccgcccaga
tcatctggtttcaagcggaaaccagaaaggggggattcttcatctgataacgtcaaggcc
agaccttctgagggatctgagtctgatgaggataaaaacgggaaaggagcaactacagat
tcagtgcaacaacgccgccagtaccgcaggcagaatcaagagtcctcctcggatacagga
tcatcctcttcggaagatgaggggcccaatagaccaacatctgggccaagtgccagaaac
ggagaggtcaggcggaggcgtagtcgtacgccttccccgaggcgacgacatagagatgca
tctcccaggaaaaggcggtctccttcacctggacgaaggcggcgttctccttcacctccg
cgccgccgtcgctctccctctccgaggcgaaggtctccgtctccgccgccccgtcgtcgg
tctccgtcaccaaggcgatactctccccctatccagcgtcgctacagcccctcccctttg
ccgccgcagaagaggaggttttcggtttctcctgttaggcgctcccctcccatggccaag
cgacggccctccaggtctcccaagcgcagggcttctcctccacagaggaggcgcacccct
ccatcctcccagtctccacttagacacaggaggagcccagtggctgccagaagaagccgg
gacacccgatccccagctgccgctgccagccgcctctctccttcccctgcaacccgcagc
cacgctctgagacgctccaccagtcctcaggggcgttttgaggcctctggtacctctccc
tttaaccaaaggagaaagtctcctccacatagtggcaaacccatccgcagagtgtcgcgc
accccagagccgcgcagcaacccgaggccatgtccaagtcctcagcccctgaggagagct
tcctctagatctgtttcgcctccacctgcagctcacaaacatccagctgctgcatccgct
tccctgtcaccgcctcgctcagccagtgcttctccaccaccagccaaaaaggccaacagc
gcttcagggagtcgatccccaagcaagacctcagatgttgatggcagtggaaagaagaag
aaaaagaagaaggaaaagaagcataaaaaagataagaaacacaagaagcacaagaagcat
aagaaagagaagagtggaggtgctgcagctggagaaggccaggaggtccagcccactgag
gaggatggagattcaagaaaggattctgaaagtgaagcagatgacggcttggacgacctg
gagaagcacctgagggaaaaggccctgcgttccatgagaaaggcccagctgtctccatcc
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