KEGG   Tetraodon nigroviridis (spotted green pufferfish): GSTEN00031467G001
Entry
GSTEN00031467G001 CDS       T04346                                 
Name
(GenBank) unnamed protein product
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
tng  Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tng00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GSTEN00031467G001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tng03019]
    GSTEN00031467G001
   03041 Spliceosome [BR:tng03041]
    GSTEN00031467G001
Messenger RNA biogenesis [BR:tng03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     GSTEN00031467G001
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     GSTEN00031467G001
Spliceosome [BR:tng03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    GSTEN00031467G001
SSDB
Motif
Pfam: RRM_1 RRM_7 HnRNPA1_LC RRM_PARP14_3 RRM_3 KduI RBD_AKAP-17A PHM7_cyt
Other DBs
NCBI-ProteinID: CAG09987
UniProt: Q4RNP5
LinkDB
Position
2
AA seq 419 aa
REPEQLRKLFIGGLSFETTEESLRAHFEKWGSLTDCVVMREPSCKRSRGFGFVTYSSLRE
VDEAMKARPHKVDGRVVEPKRAVSREDSNKPGAHLSVKKIFVGGIKEDTEEDQIRDYFEK
YGKIECVDIMEERSTGKKRGFCFVTFDDHDTVDKIVAQKYHTINSHNCEVRKALSKQEMN
AISSNRGRSGGSGNFMGRGGNYGGGSGGGGSNYGRGGYGGGRGYSDDYDNRGNYGGGPGY
GGGRGGYGGGGPGYGSQGGGFGGGCGGGYGGNDGGYGGGGSYNDFGNYGGQQSSYGPMKG
NSFGGRNSGGPYGGECEPSGPDWVKKGGKSNFFNGRPFFLFLPNRKLQVATALEAAEVAM
AHGVTKRLTFGLQFLAGEARRSGKLQVTLRQSTESIRGAHKSDLLNGRSLWKKDFVHKT
NT seq 1260 nt   +upstreamnt  +downstreamnt
agagaacctgaacagctcagaaagctctttattggaggtcttagctttgagacgacagaa
gagagtctgcgggcccattttgaaaaatgggggagcctcacagactgtgtggtgatgagg
gaacccagctgtaagcggtcacgagggtttggctttgtgacctactcctctctaagggaa
gtcgatgaggccatgaaagcaaggccccacaaagtagatggccgcgttgttgagcccaaa
agggccgtctcccgagaggactccaacaaaccaggtgcgcatctgtcagtgaagaagatc
tttgttggtggaatcaaggaagacaccgaggaagatcaaattcgtgactattttgaaaag
tacggaaagatcgaatgcgttgacatcatggaggaacgcagtactggaaagaagagagga
ttttgctttgtgaccttcgatgaccacgacaccgttgacaaaatcgttgcccagaaatac
cacacaatcaactcgcacaattgtgaggttagaaaagcactttctaaacaggaaatgaat
gctatttccagtaacaggggcaggagtgggggatctggaaactttatgggaagaggtggt
aactacggaggtggttccggtggcggtggtagcaattatggccgaggtggatacggcgga
ggacgtgggtatagtgatgattatgacaacagagggaattatggaggaggaccaggttat
ggcggaggtcgggggggctacggaggcggtggcccaggttatggtagtcagggaggcgga
tttggtggaggctgtggcggcggttatggcggcaatgatggaggatacggagggggtgga
agttacaatgactttggaaactatggtggacaacagtccagctacggccccatgaaaggg
aacagctttggtggtagaaactcaggtggaccctatggtggtgagtgtgagccttcaggc
ccagattgggtcaaaaaagggggaaaatcaaacttctttaatggtcgacccttttttctt
ttcctcccaaatcgtaaactgcaggtggctacagctctggaggcagcggaggtggctatg
gctcacggcgttactaaacgcttaacgtttgggcttcagttcttagcaggagaggcgagg
aggtcaggaaagctgcaggttactttgaggcagtcaactgaaagcattagaggagcacac
aagtcagacttgctaaatgggagaagtttatggaagaaggactttgtacacaaaacatga

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