Tetraodon nigroviridis (spotted green pufferfish): GSTEN00031821G001
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Entry
GSTEN00031821G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
GSTEN00031821G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tng03021
]
GSTEN00031821G001
03036 Chromosome and associated proteins [BR:
tng03036
]
GSTEN00031821G001
Transcription machinery [BR:
tng03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
GSTEN00031821G001
Chromosome and associated proteins [BR:
tng03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
GSTEN00031821G001
PBAF complex
GSTEN00031821G001
GBAF(ncBAF) complex
GSTEN00031821G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Ribosomal_uS5m_N
Motif
Other DBs
NCBI-ProteinID:
CAG10247
UniProt:
Q4RMY5
LinkDB
All DBs
Position
6
AA seq
621 aa
AA seq
DB search
PQRPGMPSGARMPHQGAPMGPPGPPYGGSPAVRPGLPSPVMEASRKRPAPSQQVQQQQQQ
QQQQAVQNRARNAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQE
ALKRPMKVATGAAWGPNARPPVFASANSCGFSPPSCQQQKRKLRLYISNTFNPARPDADD
SDGSIASWELRVEGKLLDDVSSHGQWKGRHSRGSQGLQSGPDHHFSWTFSPPCGGGGGVV
VGREHGGSRTTWKPGKQKKKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQP
PQFKLDPRLARLLGIHTQTRSCIIQALWQYIKTNKLQDSHDKEYINCDKYFQQIFDCPRL
KFSEIPQRLTNLLLPPDPIVINHIISVDPNDHKKTACYDIDVEVEDPLKSQMSSFLLSTA
NQQEIASLDNKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVVGN
PEEERRAAFYHEPWSQEAVSRYFYCKVRLPPSAPPSPNRPHPDFIPDSMADPAEEAGAGT
GLSRAHHLNHARVCVCLEVEAGAAASSPPPSLPPATLLSVNMSNKTTKLAANTHTHTHAH
THTHTHTYLKDLLHHTELGSE
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
cctcagcgtcctggcatgccgtccggagcgaggatgccccaccagggtgctccgatgggc
cctccggggccgccgtacggaggcagcccagcggtccggcccggcctgccttccccggtg
atggaggccagccgcaagaggcctgcgccctcgcagcaggtccagcagcagcagcagcag
cagcagcagcaggccgtccagaaccgggccaggaatgcaaagagaaggaaaatggcagac
aagattcttccgcaaaggatccgcgagctggtcccagagtcccaggcctacatggacctg
ctggccttcgagcgtaaactggaccagaccatcatgcgcaagcgcgtggacatccaggag
gccctgaagaggcccatgaaggtagcaaccggagcggcctgggggccaaacgcccggcct
cctgtctttgcttctgctaactcctgtggtttttctccgccctcgtgtcagcagcaaaag
cgaaaactgaggctctacatttccaacaccttcaaccccgccagaccggacgccgacgac
tcggacggcagcatcgcctcctgggagctgcgagtggaggggaagttgctggatgacgtg
agttctcacggacagtggaagggccgtcacagccgcggctcccagggcctacagagcggc
ccagatcatcacttttcctggaccttctcgccgccctgtggtggcggcggcggggtcgtt
gttggccgggaacacggaggttcacgcaccacatggaagccggggaagcagaaaaagaag
ttctcctccttcttcaagagcctggtgatcgagctggacaaagacctctacgggccggac
aaccacctggtggagtggcaccgcacgcccaccacgcaggagacggacggcttccagccc
ccccagttcaagctggacccccgcctggcccgcctgctgggcatccacacccagacgcgc
tcctgcatcatccaggccctctggcagtacatcaagaccaacaagctgcaggactcgcac
gacaaggagtacatcaactgtgacaagtacttccagcagatttttgactgccctcggctg
aagttctccgagatccctcagcgtctcaccaacctgctgctgcccccggaccccatcgtc
atcaaccacatcatcagcgtggaccccaacgaccataagaagacggcctgctacgacatc
gatgtggaggtggaggaccccctgaagagccagatgagcagcttcctcctctccaccgcc
aaccagcaggaaatcgcctcgctggacaacaagatccacgagaccatcgagtccatcaac
cagctgaagatccagagggacttcatgctcagtttctccagagatcctaagggctacatc
caggactggctgaagtcccagagccgagacctgaagctgatgacagacgtggtggggaac
cccgaggaggagaggagggcagcgttttaccacgagccctggtcccaggaagccgtcagc
cgctatttctactgcaaggtgaggctcccgccgtccgccccaccgtctcccaaccggccc
caccctgatttcatccctgactcgatggcagatccagcagaggaggcaggagctggaaca
ggccttagccgtgcgcaccacctaaaccacgcccgcgtgtgtgtgtgtttggaggtcgaa
gcaggcgccgccgcctcatcgccaccaccgtctcttcctcctgctactctgctctctgta
aatatgtctaacaaaacaacaaaactggctgctaacacacacacacacacacacgcacac
acacacacacacacgcacacttatctcaaagacctgctgcatcacactgaactcggatca
gaatag
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