Tetraodon nigroviridis (spotted green pufferfish): GSTEN00032152G001
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Entry
GSTEN00032152G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tng03000
]
GSTEN00032152G001
Transcription factors [BR:
tng03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
GSTEN00032152G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-ProteinID:
CAG10492
UniProt:
Q4RM90
LinkDB
All DBs
Position
10
AA seq
369 aa
AA seq
DB search
MVQHTDNSETDGSMSREATDSEESEFMACSPVSINPDWCKTATGHIKRPMNAFMVWSKIE
RRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRPKKK
PKLDSSKSSAPSPEKCGKITKTPSKKCSKIKTKSGSKSSHGYGDDCVFPSLKVAKTVKNE
LTDEDDDDEYEEDYRMGIKAGDEERLRPYNVAKVPASPTLSSSAESEGASMYEEVRSNNR
LFYNIKNITKQSTLHAASVSPASSRSVSTSSSSSSSSSSSSGSSSSGEDADDLPFDFSLN
FASSTQGSELGNPNSGNLSLSLVDKDLDSFSEGSLGSHFEFPDYCTPELSEMIAGDWLEA
NFSDLVFTY
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcacaccgacaacagcgagacggacgggagcatgtccagagaggctaccgac
tcggaggagagtgagtttatggcatgcagccccgtgtcgataaacccggactggtgcaag
acagccaccggccacatcaagagacccatgaacgcgtttatggtctggtccaagatcgag
aggagaaagattatggagcagtcgccagacatgcacaacgcggagatttccaagcgcctc
gggaagaggtggaagatgctgaaggacagcgaaaagatcccgtttatccgggaagccgag
cggctccggctaaaacacatggccgactaccccgactacaaatacagaccgaagaaaaaa
ccaaagctcgacagttccaaatcctcagcaccctctccggagaagtgcggaaagattaca
aagactcccagcaagaagtgctcaaagattaagactaaaagcggctccaagtcctctcac
ggctacggggacgactgcgttttcccaagcttaaaagttgcaaagacggtgaaaaacgag
ctcacggacgaggacgacgacgacgagtacgaggaggactaccggatggggattaaggcc
ggggacgaggagcgcctgaggccgtacaacgtagccaaagttccggcgagcccaactttg
agctcgtccgccgagtccgagggggcgagcatgtacgaggaggtgcgaagcaacaacaga
ctcttctacaacatcaaaaacatcaccaagcagagcacactgcacgccgcctccgtctca
ccagcatcctccaggtcggtctccacatcctcctcctcttcctcctcctcctcctccagc
agcggcagctcctcttccggcgaggacgcggacgatttgccgttcgattttagtttgaat
ttcgcgtccagcacccagggctcggaactgggcaacccgaattcaggaaacctctccctg
tctcttgtggataaggacctggactcgttcagcgagggcagcctgggctcccacttcgaa
ttcccagactattgcacgccagagctgagcgaaatgatcgccggggactggctggaggcg
aacttttccgacctggtctttacatactga
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