Tetraodon nigroviridis (spotted green pufferfish): GSTEN00032217G001
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Entry
GSTEN00032217G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04137
Mitophagy - animal
tng04140
Autophagy - animal
tng04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
GSTEN00032217G001
04137 Mitophagy - animal
GSTEN00032217G001
04148 Efferocytosis
GSTEN00032217G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tng03000
]
GSTEN00032217G001
Transcription factors [BR:
tng03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
GSTEN00032217G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
PAS
PAS_9
PAS_4
HLH
PAS_2
Motif
Other DBs
NCBI-ProteinID:
CAG10539
UniProt:
Q4RM43
LinkDB
All DBs
Position
10
AA seq
385 aa
AA seq
DB search
MDTGIVPEKKRVSSERRKEKSRDAARCRRGKESEVFYQLAQELPLPHSVSSSLDKASIMR
LTISYLRMRILLNAGEPLTAEETDLDLQLNGCYLKALDGFLMVLSEDGDMIYLSENISKC
LGLAQFDLTGHSVFDFIHPCDQEELREMLIHRTESLFPLLNRHCRLISGSKKAKEPNTER
RFFLRMKCTLTSRGRTVNVKSATWKVLHCLGHVRVHESPAEPDPDGAQPSAVPYLVLICD
PIPHPANIEFPLDTKTFLSRHTMDMKFTYCDERQVIPVKWRGSPLSQLSTLTFVTPFCLS
RITELMGYDPEDLLNRSVYEYYHAQDSDHLTKTHHNLFAKGQVCTGQYRMLAKRGGFVWL
ETQATVIYNTKNSQPQCVVCVNFVL
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggacacaggaattgtaccagaaaagaaaagggtgagctcagagcggaggaaggagaag
tccagggatgcggcgcgatgtcgccgcgggaaggagtcggaggtgttttaccagctggcc
caggaactgcccctgccccacagcgtcagctccagtctggacaaggcctccatcatgaga
ctcaccatcagctacctgcgcatgaggatccttctcaatgctggcgagcccctaacggcg
gaggagacggacctggatctgcagctcaatggctgctacctgaaggctctggatggcttc
ctgatggtgctgtctgaagatggagatatgatctatctctccgagaacatcagcaagtgc
ctggggctggcgcagtttgacctgactggccacagtgtttttgacttcatacatccctgc
gaccaggaggagctgagggagatgctgatccacaggacagaaagcttgtttcctctttta
aaccgtcactgtcgtctaatttcaggctccaaaaaggccaaggaaccaaacacggaaagg
aggtttttccttcgaatgaaatgcaccctgacgagcagagggcgcaccgtcaatgttaaa
tccgctacctggaaggtgctgcactgcttgggacacgtgcgcgtccacgagagccccgct
gagccggaccccgacggagcgcagccgtcggctgtgccgtacctggtgctgatctgtgac
cccatcccccaccccgccaacatcgagttccccctggacaccaagaccttcctcagccgc
catacgatggacatgaagttcacatattgtgacgagaggcaagtcatccctgttaaatgg
cgtggatctcctctgagccagctttccaccctcacgtttgtaactcctttttgcctgtcc
aggatcactgagctcatgggctatgaccccgaggatcttctgaaccggtcggtttatgag
tattaccacgcgcaggactcggaccatctcaccaagactcaccacaacctgtttgccaag
ggccaggtgtgtacgggccagtaccgaatgttggccaagagaggcggcttcgtgtggttg
gaaactcaagccacggtcatctacaacaccaagaactcgcagccgcagtgtgtcgtctgc
gtcaactttgtgctc
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