Tetraodon nigroviridis (spotted green pufferfish): GSTEN00032222G001
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Entry
GSTEN00032222G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03022
Basal transcription factors
tng03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GSTEN00032222G001
09124 Replication and repair
03420 Nucleotide excision repair
GSTEN00032222G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tng03021
]
GSTEN00032222G001
03400 DNA repair and recombination proteins [BR:
tng03400
]
GSTEN00032222G001
Transcription machinery [BR:
tng03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
GSTEN00032222G001
DNA repair and recombination proteins [BR:
tng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
GSTEN00032222G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MAT1
Motif
Other DBs
NCBI-ProteinID:
CAG10544
UniProt:
Q4RM38
LinkDB
All DBs
Position
10
AA seq
394 aa
AA seq
DB search
CENCVEMLFVRGSGNCVQCDTPLRKSNFRVQLFEDPAVDKEVEIRKKVLKIYNKRDVDFS
SLREYNDYLVASGGHRGLLEPIPAVYNLTNNIDVENTKVRMEQYQRDNRDVIQRNKAKLT
REQEELEELLLLEQQSSEQRRLEVLQEEQRQLQAKRKNKQALLDELEQSQLPATVLVAQH
KVRAAQLETQIEQQKQVVKPTSIFSTGIHMFWXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXAVIRWQRWRRKKDAVRIKWLNLVCVMGLGAGSESSTQPPLPPSGRKEEG
YIFSQGRVWEGGADGAAGLWVKPELTEECRSSHTANQSQYLQTGSVLLLTSAACVFVLRY
LNHVRAATPEDTAGGYTSALACHRAIQDALSGLL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
tgtgagaactgcgtggagatgctgtttgtgcgcggctcgggtaactgcgtgcagtgcgac
acgcccctgaggaagagcaatttccgcgtgcagctcttcgaagacccggccgtggataaa
gaggtggagattcgcaagaaggtgctgaaaatatacaacaaaagagacgttgacttctcc
agcctcagagaatacaatgactaccttgtagcaagtggaggacataggggtttgctggag
cccatcccagctgtttataacctgacaaacaacatcgatgtggagaacaccaaagtgagg
atggagcagtaccagagggacaaccgcgacgtcatccaaaggaataaggctaaactcacg
cgagaacaagaggagctggaggagctgctgctgctggagcagcagagcagcgagcagcgg
aggctggaggtgctgcaggaggagcagaggcaacttcaggccaagaggaagaacaagcag
gccctcctcgatgagctggagcagtctcagcttcccgccaccgtcttggttgcccagcac
aaggttcgggctgcgcagctggagacccagatagagcagcagaagcaggtggtcaaacct
acaagtatcttctcaactggaatccacatgttctggcnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngggcagttatcaggtggcagcgctggaga
cggaagaaagatgctgtccgtatcaagtggctcaacttggtgtgtgtgatggggctcggt
gcaggctccgagagcagcacgcagcctccactgcccccgtcaggccggaaggaggagggg
tacattttctctcagggtcgagtgtgggaaggaggggcagatggggcagcagggctctgg
gtgaaaccggagctgactgaggaatgcaggagctctcacacggccaatcagtcgcagtat
ttacagaccggctcagtgctgctgctcaccagcgctgcctgtgtgtttgtgctcaggtat
ttaaaccacgtgcgggccgccacgccagaggacacggctggaggatacacctcggctctg
gcgtgtcaccgagcaatccaggacgcgctcagcgggctcctc
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