Tetraodon nigroviridis (spotted green pufferfish): GSTEN00032223G001
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Entry
GSTEN00032223G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K15615
homeobox protein SIX4
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tng03000
]
GSTEN00032223G001
Transcription factors [BR:
tng03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
GSTEN00032223G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_TSHZ3
DUF6374
Motif
Other DBs
NCBI-ProteinID:
CAG10545
UniProt:
Q4RM37
LinkDB
All DBs
Position
10
AA seq
494 aa
AA seq
DB search
MAKSARLLNADAVRTELLVSAASSLAFSPEQVACVCEALQQGGNVDRLARFLWSLPQSDL
LRGNESILKAQALVAFHQARFQEMYSILENHSFSPSNHTFLQDLWYKARYTEAEKARGRS
LGAVDKYRIRRKYPLPRTIWDGEETVYCFKERSRNALKDMYNQNRYPSPAEKRNLAKITG
LSLTQVSNWFKNRRQRDRNPSEAQSKSESDGNHSTEDESSKGQEELSPRPLSNSSDGVIT
HGTLPIQTGPLENSAVIQQIGDIKLPPGSSSGGLYNGSLVTSNASSAVFHNGGSSYLHAP
GNLLFNGLNLGIQPLAFNPLRPSGGMLLGGSEVDMQMQTGQEKGLVGSAEDSALQYASFA
GCVNGAEVKLEGVHTMAAQNGGSSVLTFSSSSGALQLGGYSLVQVPSGGPDGDASSLLNT
EVGLPPLQLSSASSSSTITQQGNMSLNNVAVSSSNGDSFQHQDKLTMPSLHHSTVLYNMS
SSGQPSIKKEPLEG
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagagcgcacgacttctcaacgctgacgcggtgcgcacggagctgctggtgagc
gccgcctcctccctggctttctccccggagcaagtggcttgtgtctgcgaggcgctgcaa
cagggaggcaatgtggaccggctggccaggttcctgtggtccctgcctcagagcgacctg
ctgcgcggcaacgaaagcatcctgaaagcccaagccctggtggctttccaccaggctcga
tttcaggagatgtacagtattttggagaaccacagctttagcccgtccaaccacaccttc
ctacaagatctgtggtacaaagcccggtacaccgaggcggagaaggcgcgggggagatct
ctgggtgccgtggacaagtaccggatccggaggaagtatcctcttccccggacaatctgg
gacggcgaggagacggtgtattgtttcaaggaaaggtcgcgaaacgcgctgaaggatatg
tataatcagaataggtacccgtctcccgccgagaaaagaaacctcgctaagattacagga
ctctccttgacccaggtcagcaactggttcaaaaacagaagacagagagacagaaacccg
tccgaagcacaatccaaaagcgaatctgatggaaaccacagcacagaagatgagtccagt
aaaggccaggaggagttgtctccgaggcccctatctaattcctccgacggggtgatcacc
catgggaccctccccattcagacaggccctctggaaaatagtgcagtcattcaacagatc
ggggacattaaactgccccccggttccagcagtggcggcctctacaatggcagtctagta
accagtaacgcctcctccgccgtgtttcacaacggcggctcctcttacctgcacgcacct
ggaaacctcctcttcaacgggctcaatctgggcatacagccattggccttcaaccctctg
agaccgtctggagggatgctgctggggggctccgaggtggacatgcagatgcagacaggt
caggagaagggactggtgggctctgccgaggactccgccctgcagtacgcctccttcgcc
ggctgcgtgaacggagccgaggtcaagctggagggtgttcacaccatggcggcgcagaat
ggcggctcctctgtcctcaccttcagctcgtcctcaggcgcgctgcagctgggggggtac
agcctcgtccaggtgcccagcggcggcccggacggcgacgctagctccttactcaacact
gaagtgggtcttcctccgctgcagctctcatctgcctcatcttcctcaacaatcacacaa
caaggaaacatgtctctgaacaatgtagcggtgagttcctccaacggggattcgttccag
catcaggacaagctgactatgccgtctctgcaccacagcacggtcctctacaacatgagc
agctcgggccagccatccatcaagaaggagcctctggaggga
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