Tetraodon nigroviridis (spotted green pufferfish): GSTEN00032856G001
Help
Entry
GSTEN00032856G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
GSTEN00032856G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tng03021
]
GSTEN00032856G001
03036 Chromosome and associated proteins [BR:
tng03036
]
GSTEN00032856G001
Transcription machinery [BR:
tng03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
GSTEN00032856G001
Chromosome and associated proteins [BR:
tng03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
GSTEN00032856G001
RSF complex
GSTEN00032856G001
WICH complex
GSTEN00032856G001
B-WICH complex
GSTEN00032856G001
NORC complex
GSTEN00032856G001
BRF complex
GSTEN00032856G001
NuRF complex (fruit fly)
GSTEN00032856G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
AAA_14
Motif
Other DBs
NCBI-ProteinID:
CAG11049
UniProt:
Q4RKN3
LinkDB
All DBs
Position
18
AA seq
985 aa
AA seq
DB search
MSDNANCEEQREEQTELEEAGGAEMVERSLPQKLGLMDKMDRHHLHPRLKNLLLAMRRKW
GATLIAASCFDSNRHRRTEQEEDEELLNESTKTTNVCTRFDDSPSYVKTGKMRDYQVRGL
NWLISLYENGINGILADEMGLGKTLQTIALLGYMKHYRNIPGPHMVLVPKSTLYNWMNEF
KRWVPSLRAVCLIGDRDERTALIRDVLLPGEWDVCVTSYEMLIIEKAVFKKFNWRYLVID
EAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSW
FDTNNCLGDQKLVERLHTVLRPFLLRRIKADVEKTLLPKKEIKIYVGLSKMQREWYTKIL
MKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDLHLVVNSGKMVVL
DKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYGYCRLDGQTPHEERQISINAFNEP
NSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQQKQVRVFRYI
TENTVEERIVERAEMKLRLDSIVIQQGRLVDPSANKLGKDEMLSIIRHGATHVFASKESE
ITDDDIVAILERGERKTMEMSQKMSSLGESSLRNFTMDTENSSVYTFEGEDYREKKKVIT
NWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKE
ILFYRKTIGYKVPRNPELPNSAQIQKEEQAKIDEAEALTEEELEEKENLLQQGFTIWNKR
DFNQFIKANEKWGRDDIENIAREVEGKTPEEVMEYSAVFWERCNELQDIEKIMAQIERGE
ARIQRRISIKKALDSKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKES
VYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEREKAEKKKRGP
KTGSAQKRKSEGTPDGRGRKKKLKL
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgtcggataacgcaaactgcgaagaacagcgggaagagcagactgaacttgaagaagcc
ggaggagctgagatggtggaaaggagtcttcctcagaagctggggctgatggacaagatg
gatcgtcatcatcttcatccaagactaaagaatcttctgctggctatgaggagaaagtgg
ggggcaactcttattgctgcttcgtgttttgacagcaatcgtcatcgacgcacagagcaa
gaggaagatgaagagctcctgaatgagagtacaaagactacaaatgtctgtactcgcttt
gatgattcgccctcatatgtcaaaactgggaaaatgagagactaccaggtccgcggtctt
aactggctgatttctttatatgagaatggtatcaacggcatcctggcagatgagatgggt
ctaggtaagacgttgcagaccattgctctgctgggttacatgaagcactacagaaatatc
ccaggtccccacatggtgctggttcccaagtccaccctctacaactggatgaatgaattc
aagcgatgggtgccttcgctgcgtgcagtctgcctgattggagacagagatgaaaggact
gctctgatcagagatgtgctgctgcctggagaatgggacgtgtgtgtcacctcctatgaa
atgctcatcattgaaaaggcggtgttcaaaaagttcaactggagatacctggtgattgat
gaagcccacaggatcaagaatgaaaaatcaaagctgtcagaaatcgtgcgagaattcaaa
acaaccaaccgcttgttgttgactggaacaccactgcaaaacaacctccatgagctgtgg
gctctgcttaacttcctgctgcccgatgtcttcaactcctcagaggactttgactcttgg
ttcgatacaaacaactgcctgggtgatcagaagctggtggagcgtcttcacactgtcctg
cgtcctttcttgcttcgtcgtattaaagctgacgtggagaaaactctgcttcccaaaaaa
gagataaagatttatgtgggtctgagtaagatgcagcgagaatggtacacgaagattctg
atgaaggacattgacatcttgaactctgccggaaagatggacaagatgcgcctgttgaac
attctcatgcagctgaggaaatgctgcaaccacccgtacctgtttgacggggccgaaccc
ggaccaccctacaccactgacctccatctggtggtgaacagcggcaagatggtggtgctg
gataagcttctccctaagctgaaagagcagggttctcgtgtgttaatcttcagtcagatg
accagggtgctggacatcttggaggactactgcatgtggaggaactacggctactgtcgc
ctggacggccagacgccacacgaggagagacagatttccatcaatgcgttcaacgagccc
aacagcagtaagttcatcttcatgttgagcaccagagctggagggctgggcatcaacttg
gctacagcagacgtggtgatcctgtatgactccgactggaatcctcaagtagatcttcag
gccatggaccgagctcacagaattggccagcagaagcaggtgcgcgtttttcgttacatt
actgaaaacacggtggaggagaggatcgtggagagggcggagatgaagctgcgtctggac
tccattgtcattcagcagggaagacttgtggatccaagcgctaacaagctaggcaaggac
gagatgctgtccattatccgccatggtgccacacacgtatttgcttccaaggagagcgag
atcactgatgacgacattgttgcgattctggagagaggagaaaggaagactatggagatg
agtcagaagatgtcgtccctgggtgaaagctcactgaggaacttcaccatggatacagag
aacagcagtgtgtacacatttgaaggggaggattacagagagaagaaaaaggtcattacc
aactggatcgagccgcccaagagagaaaggaaagccaattacgctgtagatgcctacttc
agggaagctctgcgagtcagcgagcctaaagcacccaaggctcctcgtcctcccaagcaa
ccaaatgttcaagacttccagttcttccctccacgtctttttgaactcctggaaaaagaa
atcctcttttaccgaaaaactataggctacaaggttcctcggaatccagaattgccaaat
tcagcacaaatccaaaaagaagaacaggccaagatcgatgaagctgaagctcttacggag
gaggagctggaggagaaagagaacctgctgcaacagggttttacaatctggaacaaacgt
gacttcaaccagttcatcaaagcgaacgagaagtgggggcgagatgatatcgagaacatt
gccagagaggtcgagggaaaaactccagaggaagtcatggaatattctgcggtattctgg
gagcgttgcaatgagctgcaggatatcgagaagatcatggctcagatcgagagaggcgag
gccaggattcagcgaaggattagcatcaagaaagcactcgattcgaagatcggtcgttac
aaggctcccttccatcagcttcgtatctcctatggcaccaacaagggcaagaactacaca
gaggaggaggaccgctttctcatctgcatgcttcacaaactgggctttgacaaggagagc
gtttacgacgagttgcgtcagtgcatccgcaactcaccccagttccgctttgactggttc
cttaaatccaggaccgccatggagcttcagaggcgctgcaacaccctaatcacgctgata
gagagagagaacatggagctggaggagcgagagaaggctgagaaaaagaagagaggcccc
aagactggatcggctcaaaaacgaaagtcagaaggaacccccgacggccgaggacgcaag
aagaagctgaagttgtga
DBGET
integrated database retrieval system
